CX671927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671927 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.338e-23 Identity = 61/104 (58.65%), Postives = 74/104 (71.15%), Query Frame = -2 Query: 76 PNSESCRAETRSFLRGIDVNRLPSHAD-NEEEXXXXXXXXXXXXXSGKRSEREPNGDELEMERACSRGISDEEDGDTSRKKLRLSKDQSAILEESFKEHNTLNP 384 PNS+S + ETR+F+RGIDVNR PS A+ +E+ +GKRSERE + D SRGISD+EDGD SRKKLRLSKDQSAILEE+FK+H+TLNP Sbjct: 55 PNSDSSQKETRTFIRGIDVNRPPSTAEYGDEDAGVSSPNSTVSSSTGKRSEREEDTDPQG-----SRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNP 153
BLAST of CX671927 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16 Identity = 55/105 (52.38%), Postives = 63/105 (60.00%), Query Frame = -2 Query: 76 SFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXS-GKRSERE----------PNGDELEMERACSRGISDEED--GDTSRKKLRLSKDQSAILEESFKEHNTLNP 351 S LR IDVN PS + EE+ GKRSERE + DE+ +R SRG SDEE+ G+TSRKKLRLSKDQSA LEE+FKEHNTLNP Sbjct: 50 SDLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNP 154
BLAST of CX671927 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.616e-16 Identity = 55/108 (50.93%), Postives = 69/108 (63.89%), Query Frame = -2 Query: 76 ETRSFLRGIDVNRLPSHADNEEEXXXXXXXXXXXXXS-GKR--SEREPN-----GDELE--MERACSRGISDEED---GDTSRKKLRLSKDQSAILEESFKEHNTLNP 360 + + FLR IDVN LP+ D EEE GKR +ERE GD+L+ ++R+ SRG SDEE+ G+T RKKLRLSKDQSA+LE++FKEHNTLNP Sbjct: 52 QKQQFLRKIDVNSLPTTVDLEEETGVSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNP 159
BLAST of CX671927 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.420e-14 Identity = 56/122 (45.90%), Postives = 71/122 (58.20%), Query Frame = -2 Query: 76 SESCRAETRSFLRGIDVNRLPS----HADNEEEXXXXXXXXXXXXXSGKRSEREPNG----------DELEMERA-CSRGI-SDEEDG-----DTSRKKLRLSKDQSAILEESFKEHNTLNP 378 S ++ RSFLRGIDVNR PS ++E SGK+SERE ++ E+ERA CS G SD+EDG D+SRKKLRLSK+Q+ +LEE+FKEH+TLNP Sbjct: 65 SSERNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGVSSPNSTVSSVMSGKKSERELMAAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNP 186
BLAST of CX671927 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12 Identity = 52/110 (47.27%), Postives = 62/110 (56.36%), Query Frame = -2 Query: 76 AETRSFLRGIDVNRLPSHAD----NEEEXXXXXXXXXXXXXSGKRSEREP--NGDELEMERA-CSRGI----SDEEDG---DTSRKKLRLSKDQSAILEESFKEHNTLNP 363 ++ SFLRG +VNR S EE SG + + GDE E ERA CSRG SD+EDG D SRKKLRLSKDQ+ +LEE+FKEH+TLNP Sbjct: 78 SDAGSFLRGFNVNRAQSSVAVVDLEEEAAVVSSPNSAVSSLSGNKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNP 187
BLAST of CX671927 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 45/103 (43.69%), Postives = 54/103 (52.43%), Query Frame = -2 Query: 76 FLRGIDVNRLP------------SHADNEEEXXXXXXXXXXXXXSGKRSEREPNGDELEMERACSRGISDEEDGDTSRKKLRLSKDQSAILEESFKEHNTLNP 348 FLRGIDVNR P S ++ +EE SGKR G A + DE+ G SRKKLRLSKDQ+A+LE++FKEHNTLNP Sbjct: 85 FLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKR------GAPSAATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNP 181
BLAST of CX671927 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 45/103 (43.69%), Postives = 54/103 (52.43%), Query Frame = -2 Query: 76 FLRGIDVNRLP------------SHADNEEEXXXXXXXXXXXXXSGKRSEREPNGDELEMERACSRGISDEEDGDTSRKKLRLSKDQSAILEESFKEHNTLNP 348 FLRGIDVNR P S ++ +EE SGKR G A + DE+ G SRKKLRLSKDQ+A+LE++FKEHNTLNP Sbjct: 85 FLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASSPNSTLSSLSGKR------GAPSAATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLNP 181 The following BLAST results are available for this feature:
BLAST of CX671927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671927 ID=CX671927; Name=CX671927; organism=Citrus sinensis; type=EST; length=784bpback to top |