CX671919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: SDF2_ARATH (Stromal cell-derived factor 2-like protein OS=Arabidopsis thaliana GN=At2g25110 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 3.994e-81 Identity = 132/165 (80.00%), Postives = 150/165 (90.91%), Query Frame = 2 Query: 329 ETVEITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREK 823 E VEITYG+ +KLMHEKTKFRLHSH+VPYGSGSGQQSVTGFP V D+NSYWIVKP+ G + KQGD +KSG IRLQHM+TRKWLHSHLHASPISGNLE+SCFG + SDTGD+W+++IEGSGKTW+QDQR+RLQH+DT GYLHSH KKYQRIAGGQQEVCG+REK Sbjct: 33 EGVEITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQHMKTRKWLHSHLHASPISGNLEVSCFGDDTNSDTGDHWKLIIEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIREK 197 HSP 2 Score: 25.7942 bits (55), Expect = 3.994e-81 Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = 3 Query: 819 KKRADNVWLAAE 854 +K+ADN+WLAAE Sbjct: 196 EKKADNIWLAAE 207
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: SDF2_DICDI (Stromal cell-derived factor 2-like protein OS=Dictyostelium discoideum GN=DDB_G0284847 PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.549e-39 Identity = 85/166 (51.20%), Postives = 106/166 (63.86%), Query Frame = 2 Query: 338 EITYGTVLKLMHEKTKFRLHSHEVPYGS---GSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHS-HPKKYQRIAGGQQEVCGVREK 823 ++TYG+++KL H T FRLHSH+V YGS GSGQQSVTGFP+ DD NS W++K G QG +K+G IIRL H T+K LHSHL SP++ E+SCFG E DTGD W V E SGK W + Q +R +H DT YL + KYQ GQ E+ G + K Sbjct: 31 KVTYGSMVKLAHVPTNFRLHSHKVSYGSSGGGSGQQSVTGFPENDDTNSLWVIKGPHGNRVLQGTVVKNGDIIRLVHSNTKKNLHSHLAVSPLTKQNEVSCFGENGEGDTGDNWIVETE-SGKEWMRGQVVRFKHADTKTYLQAIESAKYQNPIPGQIEISGGKSK 195
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: SDF2_MOUSE (Stromal cell-derived factor 2 OS=Mus musculus GN=Sdf2 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.567e-31 Identity = 72/160 (45.00%), Postives = 98/160 (61.25%), Query Frame = 2 Query: 341 ITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVRE 820 +T G+V+KL++ + RLHSH+V YGSGSGQQSVTG VDD+NSYW ++ ++G IK G IRL H+ T + LHSH SP+SGN E+S FG E E D D W V+ +G W +D +R +H T L ++Y R GQ+EV G+ + Sbjct: 24 VTCGSVVKLLNTRHNVRLHSHDVRYGSGSGQQSVTGVTSVDDSNSYWRIRGKTATVCERGTPIKCGQPIRLTHINTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDYLDDWTVLC--NGPYWVRDGEVRFKHSSTDVLLSVTGEQYGRPISGQKEVHGMAQ 181
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: SDF2_HUMAN (Stromal cell-derived factor 2 OS=Homo sapiens GN=SDF2 PE=1 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31 Identity = 72/160 (45.00%), Postives = 98/160 (61.25%), Query Frame = 2 Query: 341 ITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVRE 820 +T G+V+KL++ + RLHSH+V YGSGSGQQSVTG VDD+NSYW ++ ++G IK G IRL H+ T + LHSH SP+SGN E+S FG E E D D W V+ +G W +D +R +H T L ++Y R GQ+EV G+ + Sbjct: 24 VTCGSVVKLLNTRHNVRLHSHDVRYGSGSGQQSVTGVTSVDDSNSYWRIRGKSATVCERGTPIKCGQPIRLTHVNTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDYLDDWTVLC--NGPYWVRDGEVRFKHSSTEVLLSVTGEQYGRPISGQKEVHGMAQ 181
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: SDF2_BOVIN (Stromal cell-derived factor 2 OS=Bos taurus GN=SDF2 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.560e-31 Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 2 Query: 341 ITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVRE 820 +T G+V+KL++ + RLHSH+V YGSGSGQQSVTG VDD+NSYW ++ ++G I+ G IRL H+ T + LHSH SP+SGN E+S FG E E D D W V+ +G W +D +R +H T L ++Y R GQ+EV G+ + Sbjct: 24 VTCGSVVKLLNTRHNVRLHSHDVRYGSGSGQQSVTGVTSVDDSNSYWRIRGKTATVCERGTPIRCGQPIRLTHVNTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDYLDDWTVLC--NGPYWVRDGEVRFKHSSTEVLLSVTGEQYGRPISGQKEVHGMAQ 181
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: SDF2L_MOUSE (Stromal cell-derived factor 2-like protein 1 OS=Mus musculus GN=Sdf2l1 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.733e-30 Identity = 69/158 (43.67%), Postives = 95/158 (60.13%), Query Frame = 2 Query: 341 ITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGV 814 +T G+VLKL++ K RLHSH++ YGSGSGQQSVTG + DDANSYW ++ +G ++ G +RL H+ T K LH+H SP+S N E+S FG + E D D W V SG+ W ++ +R QHV T +L ++Y GQ EV G+ Sbjct: 36 VTCGSVLKLLNTHHKVRLHSHDIKYGSGSGQQSVTGVEESDDANSYWRIRGGSEGGCPRGLPVRCGQAVRLTHVLTGKNLHTHHFPSPLSNNQEVSAFGEDGEGDDLDLWTVRC--SGQHWEREASVRFQHVGTSVFLSVTGEQYGNPIRGQHEVHGM 191
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: SDF2L_HUMAN (Stromal cell-derived factor 2-like protein 1 OS=Homo sapiens GN=SDF2L1 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 5.041e-30 Identity = 68/158 (43.04%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 341 ITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGV 814 +T G+VLKL++ + RLHSH++ YGSGSGQQSVTG DDANSYW ++ +G ++ G +RL H+ T K LH+H SP+S N E+S FG + E D D W V SG+ W ++ +R QHV T +L ++Y GQ EV G+ Sbjct: 36 VTCGSVLKLLNTHHRVRLHSHDIKYGSGSGQQSVTGVEASDDANSYWRIRGGSEGGCPRGSPVRCGQAVRLTHVLTGKNLHTHHFPSPLSNNQEVSAFGEDGEGDDLDLWTVRC--SGQHWEREAAVRFQHVGTSVFLSVTGEQYGSPIRGQHEVHGM 191
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: SDF2L_BOVIN (Stromal cell-derived factor 2-like protein 1 OS=Bos taurus GN=SDF2L1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.599e-30 Identity = 67/158 (42.41%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 341 ITYGTVLKLMHEKTKFRLHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGV 814 +T G+VLKL + + + RLHSH++ YGSGSGQQSVTG DDANSYW ++ +G ++ G +RL H+ T K LH+H SP++ N E+S FG + E D D W V SG+ W ++ +R QHV T +L ++Y GQ EV G+ Sbjct: 36 VTCGSVLKLFNTQHRVRLHSHDIKYGSGSGQQSVTGVEASDDANSYWRIRGGTEGECPRGSPVRCGQAVRLTHVLTGKNLHTHHFPSPLTNNQEVSAFGEDGEGDDLDLWTVRC--SGQHWEREAAVRFQHVGTSVFLSVTGEQYGSPIRGQHEVHGM 191
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: PMT5_YEAST (Dolichyl-phosphate-mannose--protein mannosyltransferase 5 OS=Saccharomyces cerevisiae GN=PMT5 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.574e-15 Identity = 66/178 (37.08%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 329 ETV-EITYGTVLKLMHEKTKFR-LHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVKPILGASAKQGDT----IKSGTIIRLQHMRTRKWLHSHLHASPISGNL----EISCFGGEE-ESDTGDYWRVMIEGSGKTWRQDQ--------RIRLQHVDTGGYLHSHPKKYQRIAGGQQEV 805 ETV E+ G+ + L H T LHSH Y +GS QQ VT +P +D N+ WI++ L + T + GTII+L+ ++ LHSH H P+S N E+SC+G E E D D W + I+ Q + RL+H TG YL SHP+K GQQEV Sbjct: 318 ETVAEVAVGSAVSLNHVGTAGGYLHSHLHNYPAGSMQQQVTLYPHIDQ-NNKWIIE--LAEHPNENVTSFQNLTDGTIIKLRQLKNGCRLHSHDHKPPVSQNADWQKEVSCYGYEGFEGDINDDWIIEIDKKRSEPGPAQEHIRAIETKFRLKHYLTGCYLFSHPEKLPEWGFGQQEV 492
BLAST of CX671919 vs. ExPASy Swiss-Prot
Match: PMT1_YEAST (Dolichyl-phosphate-mannose--protein mannosyltransferase 1 OS=Saccharomyces cerevisiae GN=PMT1 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.925e-13 Identity = 59/172 (34.30%), Postives = 82/172 (47.67%), Query Frame = 2 Query: 338 EITYGTVLKLMHEKTKFR-LHSHEVPYGSGSGQQSVTGFPDVDDANSYWIVK--PILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGN----LEISCFG-GEEESDTGDYWRVMIE--------GSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEV 805 ++ G+++ L H T LHSH Y +GS QQ T +P +D AN+ W+++ G S + GT +RL H TR LHSH H P+S + E+SC+G + D D W V I+ + D + RL+H TG YL SH K QQEV Sbjct: 326 DVGIGSIISLRHLSTMGGYLHSHSHNYPAGSEQQQSTLYPHMD-ANNDWLLELYNAPGESLTTFQNLTDGTKVRLFHTVTRCRLHSHDHKPPVSESSDWQKEVSCYGYSGFDGDANDDWVVEIDKKNSAPGVAQERVIALDTKFRLRHAMTGCYLFSHEVKLPAWGFEQQEV 496 The following BLAST results are available for this feature:
BLAST of CX671919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671919 ID=CX671919; Name=CX671919; organism=Citrus sinensis; type=EST; length=854bpback to top |