CX671916

Overview
NameCX671916
Unique NameCX671916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671916_ssr341 microsatellite CX671916_ssr341:341..350. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.767e-31
Identity = 56/67 (83.58%), Postives = 66/67 (98.51%), Query Frame = 3
Query:    9 EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 209
            ++++VNRCSGCR+KVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPV+KAAK+V+V
Sbjct:   94 DQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.946e-28
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 3
Query:   21 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 206
            VNRC  CRR+VGLTGFRCRCGEL+CG HRYSDRHDCS+DYKSA RDAIARENPV++AAKIVR
Sbjct:  108 VNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKIVR 169          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.185e-27
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 3
Query:   21 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 206
            VNRCS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct:  102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.185e-27
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 3
Query:   21 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 206
            VNRCS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct:  102 VNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.312e-23
Identity = 44/63 (69.84%), Postives = 57/63 (90.48%), Query Frame = 3
Query:   21 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 209
            VNRC+ CR++VGLTGFRCRCGELFC  HR+S+ H+CS+DYK+AGR+ IAR NPVI+AAKI+++
Sbjct:  112 VNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.269e-21
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 3
Query:   24 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 209
            NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.269e-21
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = 3
Query:   24 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 209
            NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 6.297e-21
Identity = 39/62 (62.90%), Postives = 53/62 (85.48%), Query Frame = 3
Query:   24 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 209
            NRC+ CR++VGLTGF+CRCG +FCG HRY + H CSYD+KSAGR+ IA+ NP++KAAK+ ++
Sbjct:  109 NRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.297e-21
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 3
Query:   24 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 209
            +RC+ C R VGL GF CRCG +FCG HRYSDRHDC YDY+ AGRDAIAR NPV++  K+ ++
Sbjct:   87 SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVEKL 148          
BLAST of CX671916 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.832e-20
Identity = 37/62 (59.68%), Postives = 52/62 (83.87%), Query Frame = 3
Query:   24 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 209
            NRC+ CR++VGLTGF CRCG ++C  HRYSD+H+C +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  112 NRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173          
The following BLAST results are available for this feature:
BLAST of CX671916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP5_ARATH8.767e-3183.58Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ6.946e-2885.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSJ1.185e-2785.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI1.185e-2785.48Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ2.312e-2369.84Zinc finger AN1 domain-containing stress-associate... [more]
SAP8_ORYSJ1.269e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI1.269e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP6_ARATH6.297e-2162.90Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ORYSJ6.297e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ1.832e-2059.68Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13H06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13H06-O11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671916 ID=CX671916; Name=CX671916; organism=Citrus sinensis; type=EST; length=467bp
CCAACGTAGAGAAACGAGTTGTGAATCGGTGCTCCGGTTGTCGACGAAAG
GTTGGATTGACCGGATTTAGATGTCGCTGCGGGGAGCTGTTCTGCGGCGA
ACATCGGTACTCCGATCGTCACGATTGCAGCTATGATTATAAATCGGCCG
GTCGCGACGCCATCGCGAGAGAAAATCCGGTGATCAAAGCTGCCAAGATC
GTTAGAGTTTGAAAGCTTAATTTGAAAACACGATTGAAAGGTCAAAAATT
CAGATCAATTTATACACATCATGAAACGATGTCATTTCGCCAGATCTCTT
CCTCAGGAATATGGTGATCAAAGGATCGAAAGAGGGTTTTAGAGAGAGAG
TTGATCAGATTTATGAATTGTTTCTCTTTCGATAATTTATAATTTTCTTT
CTTTTCTAGAGTTTGTTTCTTCAGAAATGAAAAAGATTATTGTGGTTTTA
AGAAAAAAAAAAAACCT
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