CX671908

Overview
NameCX671908
Unique NameCX671908
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.832e-53
Identity = 102/183 (55.74%), Postives = 132/183 (72.13%), Query Frame = -2
Query:  338 ALSYNGNLVKHVTLGKGTPLMPNRTFEVYIFALFNENLKPS-ISEQNFGLFKPDFTPVYDVGILRNKQAQGPAKAPGGRPPTEAPVAKP-PSGAVTGRKWCVPKSDASDAALQANIDYVCGTGVDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDY 880
            A  +N  +++  + GKGTPLMPNRTFE Y+F+LF+EN KP  I+E++FGLF PDFTPVYD+G+LR+  +  P  +P    P+  P  KP PSG   G KWCV K  A+   LQ NI+Y CG  VDCKPIQ+GG CF+PN++++HA+Y MNA+YQANG  D ACDF  TG++TS+DPSY  C Y
Sbjct:  284 ARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPN---PSPNPSPKPAPSG---GGKWCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 3.207e-43
Identity = 87/182 (47.80%), Postives = 114/182 (62.64%), Query Frame = -2
Query:  338 ALSYNGNLVKHVTLGKGTPLMPNRTFEVYIFALFNENLKPS-ISEQNFGLFKPDFTPVYDVGILRNKQAQGPAKAPGGRPPTEAPVAKPPSGAVTGRKWCVPKSDASDAALQANIDYVCGTGVDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDY 880
            A +YNGNL+ H+    GTPLMP +  + YIFAL++ENLKP   SE+ FGLFK D + VYDVG+ ++  +                 ++ PSG VT   WCVPK  A++  LQA++D+ CG G+DC  IQ GG CF PNNV SHAAYAMN ++Q +      CDF+KT  +TS +PSY  C Y
Sbjct:  283 AKAYNGNLIAHLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSSSS-----------------SQTPSGKVTSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVY 447          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.034e-33
Identity = 84/219 (38.36%), Postives = 113/219 (51.60%), Query Frame = -2
Query:  260 ALSYNGNLVKHVTLGKGTPLMPNRTFEVYIFALFNENLKPSI-SEQNFGLFKPDFTPVYDVGIL-RNKQAQGPAKAPGGRPPT--EAPVAKPPSGAVTG-------RKWCVPKSDASDAALQANIDYVCGTG-VDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDYTHVEGKALKLEKSVAGISTGLCTVIE 880
            AL+YN NL++HV    GTP  P    +VY+F+LFNEN KP I SE+N+G+F  + T VY +     N     P  +  G  P+   +P+    S    G       +KWC+  S AS   LQ  +D+ CG G VDC  +Q   PCF P+ V SHA+YA N +YQ +G     C FN   V    DPSY  C Y  +        +++AG  TG  T I+
Sbjct:  283 ALAYNTNLIRHVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYM-IAPATDGFNRTMAGNITGNITAID 500          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.412e-32
Identity = 75/198 (37.88%), Postives = 103/198 (52.02%), Query Frame = -2
Query:  293 ALSYNGNLVKHVTLGKGTPLMPNRTFEVYIFALFNENLKPSI-SEQNFGLFKPDFTPVYDVGILRNKQAQGPAKAPGGRPPTEAPVAKPPSGAVTGRKWCVPKSDASDAALQANIDYVCGTG-VDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDYTHVEGKALKLEKSVA 880
            A +YN N+++HV   +GTP  P     VYIF+LFNEN K  + SE+N+GLF PD T VY        Q     K+ G    +    +   S +     WC+  S AS+  L+  +D+ CG G VDC  IQ   PCF P+ + SHA++  N+++Q N   D AC F   GV  + DPSY+ C Y    G   K   + A
Sbjct:  284 AETYNSNIIRHVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVY--------QLDFTGKSNGFHSNSSGTNSSGSSNS-----WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYITAGGNKTKATNATA 468          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.889e-27
Identity = 76/222 (34.23%), Postives = 109/222 (49.10%), Query Frame = -2
Query:  251 SYNGNLVKHVTLGKGTPLMPNRTFEVYIFALFNENLK-PSISEQNFGLFKPDFTPVYDVGILRNKQAQGPAKAPGGRPPTEAPVAKPPSGAVTGRKWCVPKSDASDAALQANIDYVCGTG-VDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDY-----------THVEGKALKL-EKSVAGISTGLCTVIEIIV 874
            +YN NL+KHV    GTPL P  T  VYI+ LFNE+L+ P +SE ++GLF  + TPVY    L +    G   A                   T + +C+         LQA +D+ CG G  +C  IQ G  C+ PNNV+ HA++A N++YQ  G    +CDF    ++T+ DPS+ +C +           T V    +   E +   +S G C  I I+V
Sbjct:  196 TYNSNLIKHVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVY----LLHVSGSGTFLA----------------NDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFPGSKKVGNRTQTVVNSTEVAAGEATSRSLSRGFCVTIMILV 397          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 7.937e-26
Identity = 61/187 (32.62%), Postives = 93/187 (49.73%), Query Frame = -2
Query:  323 ALSYNGNLVKHVTLGKGTPLMPNRTFEVYIFALFNENLKPSISEQNFGLFKPDFTPVYDVGILRNKQAQGPAKAPGGRPPTEAPVAKPPSGAVTGRKWCVPKSDASDAALQANIDYVCGTG-VDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDYTHVEG 880
            A +YN NL++HV    GTP  P      YI+ L+NE+ K  +SE+N+GLF  +  PVY + +  +                        +   T + +C  +  A    LQA +D+ CG G +DC PI+ G  C+ P+NV +HA YA + +Y   G +  AC+FN    +T+ DPS+  C +    G
Sbjct:  291 ANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDTKAGLSEKNWGLFNANGEPVYVLRLTNSGSVL--------------------ANDTTNQTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVFAGSRG 457          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.497e-24
Identity = 66/185 (35.68%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  335 ALSYNGNLVKHVTLGKGTPLMPNRTFEVYIFALFNENLKPS-ISEQNFGLFKPDFTPVYDVGILRNKQAQGPAKAPGGRPPTEAPVAKPPSGAVTGRK-WCVPKSDASDAALQANIDYVCGTG-VDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDYT 880
            A ++N NL+K V    G P  P+     YI+ L+NE+ +   +SE+N+G+  P+ T VY            P    GG            S A+ G   +CV K+DA D  L   +++ CG G  +C  IQ G PC+ PN+V+SHA++A N +YQ        CDF+ T + T+ DPSY  C YT
Sbjct:  285 AETFNTNLIKRVLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVY------------PLSLSGGSS----------SAALNGSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAYT 447          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.688e-24
Identity = 61/181 (33.70%), Postives = 90/181 (49.72%), Query Frame = -2
Query:  344 ALSYNGNLVKHVTLGKGTPLMPNRTFEVYIFALFNENLKPS-ISEQNFGLFKPDFTPVYDVGILRNKQAQGPAKAPGGRPPTEAPVAKPPSGAVTGRKWCVPKSDASDAALQANIDYVCGTG-VDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEAC 880
            A +YN NL++HV    GTP  P      YI+ L+NE+ +P  +SE+N+GLF  + TPVY + +                    A      +   T + +C+ K       LQA +D+ CG G VDC  +  G  C+ P++V +H+ YA NA+YQ  G    +CDF     +T+ DPS   C
Sbjct:  282 ANTYNSNLIQHVINKTGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRL--------------------AGAGAILANDTTNQTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTC 442          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E13L3_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 3 OS=Arabidopsis thaliana GN=At5g08000 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = -2
Query:  338 TGRKWCVPKSDASDAALQANIDYVCGTGVDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDY 601
            T   WCV K+  SD+ LQ  +DY CG G DC P    G CFNP+NVR+H  YA+N+F+Q  G    +C+F  T  LT+ DPSY  C +
Sbjct:   17 TSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAF 104          
BLAST of CX671908 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.508e-20
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = -2
Query:  338 WCVPKSDASDAALQANIDYVCGTGVDCKPIQAGGPCFNPNNVRSHAAYAMNAFYQANGLHDYACDFNKTGVLTSADPSYEACDY 589
            WCV K+  SD  LQA +DY CG G DC P +    CFNP+NVRSH  YA+N+F+Q  G    +C+F+ T   T++DPSY  C +
Sbjct:   21 WCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAF 104          
The following BLAST results are available for this feature:
BLAST of CX671908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
E13B_WHEAT5.832e-5355.74Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E137_ARATH3.207e-4347.80Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1312_ARATH1.034e-3338.36Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E1313_ARATH7.412e-3237.88Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E131_ARATH1.889e-2734.23Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E132_ARATH7.937e-2632.62Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E134_ARATH1.497e-2435.68Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E133_ARATH5.688e-2433.70Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E13L3_ARATH4.507e-2147.73Glucan endo-1,3-beta-glucosidase-like protein 3 OS... [more]
E13L2_ARATH6.508e-2048.81Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13H02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13H02-O3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671908 ID=CX671908; Name=CX671908; organism=Citrus sinensis; type=EST; length=881bp
TTTTTTTTTTTTTTTTTCTGATCCAAACCGTATGAGGCAGCCAAGCCCAA
ATAATAGAATACACATGAAGTAAAAAATAATACAAGGTACAATTAAGCAC
TACACCATGCCTACCAAAAGAAAAAATAAAAAACCATCAGGCAAAGACAA
CATCAAGGCCCAATTTTAAACCCAATGGCGGAAGCTATGCCTGTACATAA
CGATCCTCTTACAGGTTTTAAATTAGAAAAAGAAGTTGAATAAAAGCTAC
GACAATAATCTCTATAACGGTGCACAATCCCGTTGAGATTCCCGCCACCG
ACTTTTCCAATTTTAGAGCTTTTCCTTCCACATGGGTATAATCACATGCC
TCGTAACTTGGGTCGGCTGAAGTGAGGACTCCTGTTTTGTTGAAATCACA
AGCATAGTCATGAAGCCCGTTGGCCTGATAGAAGGCGTTCATGGCGTATG
CTGCGTGTGACCGCACATTGTTCGGATTGAAGCAGGGCCCACCGGCTTGT
ATAGGCTTGCAATCCACGCCAGTGCCGCACACGTAGTCTATGTTTGCCTG
CAGCGCTGCATCCGAGGCGTCTGATTTTGGCACGCACCATTTCCTGCCCG
TGACCGCGCCTGATGGCGGTTTTGCAACTGGAGCTTCGGTGGGAGGTCTT
CCACCTGGTGCTTTCGCGGGACCCTGTGCCTGTTTATTACGCAAAATGCC
CACATCATAAACCGGCGTAAAATCGGGTTTAAACAACCCGAAATTCTGCT
CCGATATGGATGGTTTCAGATTCTCGTTGAATAAGGCGAAAATGTACACC
TCAAAAGTCCTGTTAGGCATCAGAGGCGTTCCTTTTCCCAGAGTCACGTG
CTTCACGAGATTCCCATTATACGACAGCGCA
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