CX671907

Overview
NameCX671907
Unique NameCX671907
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8010 contig Csv1_Contig8010:127..863. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX671907 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.394e-67
Identity = 125/185 (67.57%), Postives = 143/185 (77.30%), Query Frame = 1 
Query:   82 GGIVTGPSARGMSTRPATASLNDSSPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWVXXXXXXXXXXXXXXXXXXXXXXXXFERRRENM 636
            GG+V   S +G+ST+  ++SLND +PNWSNRPPKETILLDGCDFEHWLVV+E P+G+PTRDEIID YIKTLA +  G EDEARMKIYSVST+ YYAFGALV E+ S+KLKEL  VRWVLPDSYLDV+NKDYGGEPFI+G+AVPYDPKYHEEW+                        FERRRENM
Sbjct:   57 GGLV---SVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIV-GSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENM 237
[Close]
BLAST of CX671907 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.225e-32
Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 1 
Query:  100 PSARGMSTRPATASLNDSSPNWSNRPPKETILLDGCDFEHWLVVMEKPEGD-PTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFINGQAVP-----YDPK 522
            P+ R ++    ++  N+++ N      +ETI+L GCD+ HWL+VME P+   PTR+++ID Y+ TLATV  G  +EA+  +Y+ ST  Y  F   V EETS K K LPGV WVLPDSY+DVKNKDYGG+ ++NG+ +P     Y PK
Sbjct:   51 PTVRALTDGEYSSRRNNNNNNSGEE--RETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVL-GSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPK 194
The following BLAST results are available for this feature:
BLAST of CX671907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UMP1_ARATH1.394e-6767.57Uncharacterized protein At3g15000, mitochondrial O... [more]
DAG_ANTMA7.225e-3247.62DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13H01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13H01-O1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671907 ID=CX671907; Name=CX671907; organism=Citrus sinensis; type=EST; length=737bp
ATCAAGCCCTCTTCCCGTTCTCTACCCCTCCTCTTCCTCAACCGCTTCCG
CCCTTTGTCCACCGCGGTTCGTTTTGGCTCTGGCGGAATCGTCACCGGGC
CCTCCGCTCGCGGGATGTCGACACGTCCCGCCACCGCTTCGCTCAACGAC
AGCAGCCCCAATTGGTCGAACCGGCCGCCTAAAGAAACGATTTTGCTTGA
TGGGTGTGATTTTGAGCACTGGCTCGTTGTGATGGAAAAGCCTGAAGGGG
ACCCCACTAGGGACGAGATTATTGATCGTTATATCAAAACCCTTGCCACG
GTTTTTGACGGCCGTGAGGATGAAGCAAGGATGAAGATCTACTCAGTTTC
AACTAAGCACTACTACGCATTTGGAGCTCTTGTGGATGAAGAAACTTCAT
ACAAGCTCAAAGAGTTGCCTGGAGTGCGCTGGGTTCTTCCTGATTCATAT
TTGGATGTTAAAAACAAAGATTATGGAGGGGAACCTTTCATTAATGGGCA
GGCTGTTCCTTATGACCCAAAGTATCATGAGGAATGGGTTAGGAACAATG
CTCGTGCTAATGAGCGTAATAGGCGCAATGATAGGCCTCGCAGCTACGAT
AGATCTAGAAACTTTGAAAGAAGAAGGGAGAACATGCAGAACCGCAATTT
TCAGAACCAGGGTATGCCAAACCATGCACCTAATATGAGTGGTATGCCCC
CTAACAACGTCCCTTCCAGCAGCAACATGTCACCAAA
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