CX671895

Overview
NameCX671895
Unique NameCX671895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7606 contig Csv1_Contig7606:690..1467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.415e-97
Identity = 181/211 (85.78%), Postives = 192/211 (91.00%), Query Frame = -1
Query:  146 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 778
            FKAIALTVDTPRLGRRE+DIKNRFTLPP LTLKNF+GLDLGKMDEANDSGLA+YVAGQIDR+LSWKDV+WLQTITKLPILVKGVLT ED             VSNHGARQLDYVPATI ALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV+SLAAEGE GVR+VL+MLR+EFEL MALSGCRSLKEI+R+HI TEWD
Sbjct:  149 FKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALSGCRSLKEISRNHITTEWD 359          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 3.485e-96
Identity = 176/211 (83.41%), Postives = 191/211 (90.52%), Query Frame = -1
Query:  146 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 778
            FKAIALTVDTPRLGRRE+DIKNRFTLPP LTLKNF+GLDLGKMDEANDSGLA+YVAGQIDR+LSWKD++WLQTIT +PILVKGVLT ED             VSNHGARQLDYVPATI ALEEVVKATQGR+PVFLDGGVRRGTDVFKALALGASGIFIGRPVV++LAAEGE GV++VL+MLR+EFEL MALSGCRSL EITR+HIVTEWD
Sbjct:  149 FKAIALTVDTPRLGRRESDIKNRFTLPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDIQWLQTITNMPILVKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALSGCRSLSEITRNHIVTEWD 359          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.853e-95
Identity = 173/211 (81.99%), Postives = 189/211 (89.57%), Query Frame = -1
Query:  146 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 778
            FKAIALTVDTPRLGRREADIKNRF LPPFLTLKNF+G+DLGKMD+ANDSGL++YVAGQIDRSLSWKDV WLQTIT LPILVKGV+TAED             VSNHGARQLDYVPATIMALEEVVKA QGRIPVFLDGGVRRGTDVFKALALGA+G+FIGRPVV+SLAAEGE GV++VL+M+R+EFEL MALSGCRSLKEI+R HI  +WD
Sbjct:  149 FKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWD 359          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.359e-60
Identity = 119/206 (57.77%), Postives = 151/206 (73.30%), Query Frame = -1
Query:  170 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN---DSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 778
            +KAI +TVDTP LG R  D++NRF LPP L +KNF+   L    E N   DSGLAAYVA  ID S+SW+D+KWL+ +T LPI+ KG+L  +D             VSNHGARQLD VPATI  L E+V+A +G++ VFLDGGVR+GTDV KALALGA  +F+GRP+V+ LA +GEKGV+ VLE+L+EEF LAMALSGC+++K I +
Sbjct:  152 YKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.407e-59
Identity = 117/206 (56.80%), Postives = 150/206 (72.82%), Query Frame = -1
Query:  170 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN---DSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 778
            +KAI +TVDTP LG R  D++NRF LPP L +KNF+  DL    + N   +SGLA YVA  ID SLSW D+ WL+ +T LPI+VKG+L  +D             VSNHGARQLD VPATI  L E+V+A +G++ VFLDGGVR+GTDV KALALGA  +F+GRP+++ LA +GEKGV+ VLE+L+EEF LAMALSGC+++K I +
Sbjct:  152 YKAIFVTVDTPYLGNRIDDVRNRFKLPPQLRMKNFETNDLAFSPKGNFGDNSGLAEYVAQAIDPSLSWDDITWLRRLTSLPIVVKGILRGDDAKEAVKHGVDGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDK 357          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.098e-49
Identity = 103/211 (48.82%), Postives = 137/211 (64.93%), Query Frame = -1
Query:  146 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 778
            + A+ LTVDTP LG+R AD KN F LP  L+LK F+ L L  +D     GL  Y+A  ID SL+W D+KWL++ITKLPILVKG++  +D             VSNHG RQLD  P+TI  L  + K  +GR+P+ LDGG+RRGTDV KALA GA+ + IGRP+++ L+  G+ GV +VL +L  E +LAMAL+G  ++ +I    I   WD
Sbjct:  178 YSALVLTVDTPFLGKRTADFKNSFKLPNGLSLKIFEKLMLSNLD----GGLNQYIATMIDPSLTWNDLKWLKSITKLPILVKGIMCPKDAELALQYGADGIIVSNHGGRQLDTCPSTIEVLPYISKVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIGRPIIWGLSTGGKDGVLKVLNLLNSELQLAMALTGITNISDINNSII---WD 381          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.664e-47
Identity = 95/206 (46.12%), Postives = 135/206 (65.53%), Query Frame = -1
Query:  161 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 778
            FKA+ +TVD P++G R  DI N+  L   L LK+    ++G +       +  +    ID S+ W+D+ W Q++T+LPI++KG+LT ED             VSNHG RQLD VPA+I AL EVV A +G++ V+LDGG+R G DV KALALGA  +F+GRP+++ LA +GE GV+ VL++L+ EF  +M L+GCRS+ EI +D I
Sbjct:  150 FKALVITVDVPKVGNRRNDITNQVDLMKKLLLKDLGSPEMGNV-------MPYFQMSPIDPSICWEDLSWFQSMTRLPIILKGILTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASIDALTEVVAAVKGKVEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGLAYKGEHGVKEVLDILKNEFHTSMTLTGCRSVAEINQDLI 348          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.896e-44
Identity = 99/204 (48.53%), Postives = 129/204 (63.24%), Query Frame = -1
Query:  167 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 778
            FKA+ +T+DTP  G R  DI+N+  L   LTL + Q    G       + +  +    I  SL W D+ W Q+IT+LPI++KG+LT ED             VSNHG RQLD V A+I AL EVV A +G+I V+LDGGVR G DV KALALGA  IF+GRP+++ LA +GE GV+ VL +L  EF  +MAL+GCRS+ EI R+
Sbjct:  150 FKALVITLDTPVCGNRRHDIRNQ--LRRNLTLTDLQSPKKG-------NAIPYFQMTPISTSLCWNDLSWFQSITRLPIILKGILTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFHTSMALTGCRSVAEINRN 344          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.218e-42
Identity = 96/206 (46.60%), Postives = 130/206 (63.11%), Query Frame = -1
Query:  161 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 778
            FKA+ +T+DTP LG R  D +N+  L   + LK+ + L   K ++   S   ++       S  W D+  LQ+IT+LPI++KG+LT ED             VSNHG RQLD V A+I AL EVV A +G+I V++DGGVR GTDV KALALGA  IF+GRP+++ LA +GE GV+ VL++L  E    M LSGC+S+ EI+ D I
Sbjct:  150 FKALVITIDTPVLGNRRRDKRNQLNLEANILLKDLRAL---KEEKPTQSVPVSFPKA----SFCWNDLSLLQSITRLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQSVAEISPDLI 348          
BLAST of CX671895 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.455e-42
Identity = 97/206 (47.09%), Postives = 129/206 (62.62%), Query Frame = -1
Query:  161 FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 778
            FKA+ +TVD P LG R  + ++   L   + LK+ +     K      SGL   ++     S  W D+  LQ++T+LPI++KG+LT ED             VSNHG RQLD VPA+I AL EVV A  G+I V++DGGVR G DV KALALGA  IF+GRP+++ LA +GE GV+ VL++L+EE    MALSGCRS+ EI+ D I
Sbjct:  150 FKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESK------SGLPTPLS-MPSSSSCWNDLPLLQSMTRLPIILKGILTKEDAELAVKHNIRGIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMALSGCRSVAEISPDLI 348          
The following BLAST results are available for this feature:
BLAST of CX671895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
GOX2_ARATH1.415e-9785.78Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX1_ARATH3.485e-9683.41Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
GOX_SPIOL3.853e-9581.99Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
HAOX1_HUMAN2.359e-6057.77Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX1_MOUSE3.407e-5956.80Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
HAOX_DICDI1.098e-4948.82Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX2_BOVIN6.664e-4746.12Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
HAOX2_HUMAN6.896e-4448.53Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
HAOX2_RAT2.218e-4246.60Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
HAOX2_MOUSE6.455e-4247.09Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13G06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13G06-M11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671895 ID=CX671895; Name=CX671895; organism=Citrus sinensis; type=EST; length=778bp
CAGAAGCTTAAAATAATTCAGACTCAATTAAACATGAACAAGTTCTCCAA
GAAAAAGAAGTAATAGAAAGTAACCAAATTATTGCTCTTTCTTCTATTTT
GCATGCACGTAACTATAACCTGGGAACCGGGCGAGGGAGAGAAGCATCCC
ATTCAGTGACGATGTGATCACGAGTAATCTCTTTGAGTGAGCGGCAACCA
CTTAGTGCCATTGCTAGCTCAAATTCTTCACGCAGCATCTCGAGTACTCT
TCTAACGCCTTTCTCTCCCTCAGCTGCCAATGAGTACACCACTGGTCGTC
CAATAAATATACCAGAGGCTCCAAGTGCCAATGCTTTGAAGACATCAGTT
CCTCGCCTAACACCACCATCCAAGAACACAGGAATACGCCCCTGAGTAGC
TTTCACAACCTCTTCCAGGGCCATGATAGTGGCAGGGACATAGTCAAGTT
GACGAGCTCCATGATTGGATACAATAATCCCAGCTGCTCCAGCTTGAACT
GCAATCCGCGCATCCTCTGCTGTGAGTACACCCTTCACCAGAATTGGCAA
TTTGGTGATTGTTTGAAGCCACTTCACGTCCTTCCAGCTCAGAGAACGAT
CAATTTGACCAGCAACATAGGCAGCAAGCCCAGAGTCATTTGCCTCGTCC
ATCTTGCCAAGGTCCAAACCCTGAAAATTCTTTAATGTCAAAAATGGTGG
TAGAGTGAATCTGTTCTTGATGTCAGCTTCTCTGCGACCCAGCCTCGGGG
TATCAACTGTTAGAGCAATGGCCTTGAA
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