CX671878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671878 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.464e-50 Identity = 99/234 (42.31%), Postives = 146/234 (62.39%), Query Frame = -2 Query: 160 ADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRYCEGLKRCGKEAYLIEYPNAFHGFYSFPELRESCLFINEVRDFMQKQCE 861 A+S+ +DTLCRR AV++SVNYR +PE++YPC Y+DG+ V+ +++++ + F+ GDS+GGNI H+VAV+A + ++++G I + P FGG ERTESE RL G F+ V DW+WRAFLPEG DR+HPA + FGP S ++ G FP ++V+V G D + DWQ +Y EGLK+ G+E L+ A GFY P ++E+ F+ +C+ Sbjct: 120 ANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSSWLRSKKDSKVRI---FLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRL-DGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRS--KSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAFVNAECQ 344
BLAST of CX671878 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.537e-47 Identity = 95/233 (40.77%), Postives = 140/233 (60.09%), Query Frame = -2 Query: 163 ADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLRNCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRYCEGLKRCGKEAYLIEYPNAFHGFYSFPELRESCLFINEVRDFMQKQC 861 A+S+ +DTLCRR V++SVNYR +PE+ YPC Y+DG+ + ++++ + + F+ GDS+GGNIAH+VA++A + ++++G I + P FGG ERTESE L G F+ V DW+W+AFLPEG DR+HPA N F P G ++ G FP ++V+V G D + DWQ Y EGLK+ G+E L+ A GFY P ++E+ F+ +C Sbjct: 122 ANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVHI---FLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESEKSL-DGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPR--GKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAEC 345
BLAST of CX671878 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.620e-47 Identity = 96/239 (40.17%), Postives = 142/239 (59.41%), Query Frame = -2 Query: 169 ADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLR-NCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRYCEGLKRCGKEAYLIEYPNAFHGFYSFPE-------LRESCLFINEVRDFMQK 861 A+S+ +DT CRR V++SV+YR SPEH+YPC Y+DG++ + ++ + + G D ++ GDS+GGNIAH+VAV+A + ++G I + P FGG+ERT+SE + G F+ ++ DW+WRA+LPEG DRDHPA N FGP G ++ G +FP ++V+V G D + DWQ Y +GLK+ G E L+ A GFY P + E F++ + D K Sbjct: 122 ANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQ----SGKDSNVYVYLAGDSSGGNIAHNVAVRATNE---GVKVLGNILLHPMFGGQERTQSE-KTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPR--GQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLMEELNKFVHSIEDSQSK 350
BLAST of CX671878 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.994e-46 Identity = 97/230 (42.17%), Postives = 136/230 (59.13%), Query Frame = -2 Query: 175 ADSSAFDTLCRRFAKELNAVIISVNYRLSPEHKYPCQYEDGFDVITFIDNNPNFEGFPTDGADLR-NCFIGGDSAGGNIAHHVAVKACRREFTNLNIIGVIAIQPGFGGEERTESEIRLASGAPFLNVERIDWFWRAFLPEGSDRDHPAANVFGPNSGGDAISGFDFPATVVIVGGFDPLLDWQKRYCEGLKRCGKEAYLIEYPNAFHGFYSFPELRESCLFINEVRDFM 861 A S+ +D+LCRRF K V++SVNYR +PEH+YPC Y+DG+ + ++ + P F G D + F+ GDS+GGNIAHHVAV+A + + G I + FGG ERTESE RL G F+ ++ DW+W+A+LPE +DRDHPA N FGPN G + G F +++IV G D D Q Y + L+ G +++ NA GFY P + E+ DF+ Sbjct: 129 ASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQP----FMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADE---GVKVCGNILLNAMFGGTERTESERRL-DGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPN--GRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFL 348 The following BLAST results are available for this feature:
BLAST of CX671878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671878 ID=CX671878; Name=CX671878; organism=Citrus sinensis; type=EST; length=862bpback to top |