CX671862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671862 vs. ExPASy Swiss-Prot
Match: CYP38_ARATH (Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic OS=Arabidopsis thaliana GN=CYP38 PE=1 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 3.844e-77 Identity = 138/163 (84.66%), Postives = 153/163 (93.87%), Query Frame = -3 Query: 200 FVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKTRTIPLEIMVEGGKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDEFEDNFGSNQVFWVLKERELTPSNANILDGRYAVFGYVTEKEGFLADVKVGDVIQSIQVVSGLENFVNPSYKIA 688 FVDLV+RHFYDGMEIQR+DGFVVQTGDPEGPAEGFIDPSTEKTRT+PLEIMV G K+PFYG+TLEELGLYKAQ +PFNAFGTMAMAR+EFE++ GS+QVFW+LKE ELTPSN+NILDGRYAVFGYVT+ E FLAD+KVGDVI+SIQVVSGLEN NPSYKIA Sbjct: 274 FVDLVERHFYDGMEIQRSDGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKVGDVIESIQVVSGLENLANPSYKIA 436
BLAST of CX671862 vs. ExPASy Swiss-Prot
Match: TLP40_SPIOL (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Spinacia oleracea GN=TLP40 PE=1 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 4.250e-76 Identity = 135/163 (82.82%), Postives = 152/163 (93.25%), Query Frame = -3 Query: 200 FVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKTRTIPLEIMVEGGKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDEFEDNFGSNQVFWVLKERELTPSNANILDGRYAVFGYVTEKEGFLADVKVGDVIQSIQVVSGLENFVNPSYKIA 688 F+DLV+RHFYDGMEIQR DGFVVQTGDPEGPAEGFIDPSTEK RTIPLEIMVEG K P YG+TLEELGLYKAQTKLPFNAFGTMAMAR+EFE+N GS+Q+FW+LKE ELTPSNANILDGRYAVFGYVT+ + +LAD+KVGDVI+S+Q VSG++N VNP+YKIA Sbjct: 286 FLDLVERHFYDGMEIQRRDGFVVQTGDPEGPAEGFIDPSTEKPRTIPLEIMVEGEKVPVYGSTLEELGLYKAQTKLPFNAFGTMAMAREEFENNSGSSQIFWLLKESELTPSNANILDGRYAVFGYVTDNQDYLADLKVGDVIESVQAVSGVDNLVNPTYKIA 448
BLAST of CX671862 vs. ExPASy Swiss-Prot
Match: PPI3_SYNY3 (Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase sll0408 OS=Synechocystis sp. (strain PCC 6803) GN=sll0408 PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.399e-41 Identity = 84/158 (53.16%), Postives = 109/158 (68.99%), Query Frame = -3 Query: 218 FVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKTRTIPLEIMVEGGKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDEFEDNFGSNQVFWVLKERELTPSNANILDGRYAVFGYVTEKEGFLADVKVGDVIQSIQVVSGLENFVN 688 FVDLVQR FYDG+ R+ D FV Q GDP GP GFIDP T++ R IPLEI+V+G + P YG TLE+ G+Y + LPFNA+G +A+AR E E N GS+Q F+ + ELTP N++DGRY+VFGYV + + L + GD I S +V+SG +N VN Sbjct: 219 FVDLVQRKFYDGLPFIRSEDFFVTQAGDPPGPEAGFIDPQTKEYRAIPLEILVKGEEGPIYGMTLEDAGMYLPELALPFNAYGAIALARPETEPNGGSSQFFFFKFDTELTPPGFNLMDGRYSVFGYVVDGKETLEQLSEGDKIVSAKVISGADNLVN 376
BLAST of CX671862 vs. ExPASy Swiss-Prot
Match: PPI1_SYNY3 (Probable peptidyl-prolyl cis-trans isomerase sll0227 OS=Synechocystis sp. (strain PCC 6803) GN=sll0227 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19 Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = -3 Query: 227 FVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEG-FIDPSTEKTRTIPLEIMVEGG-----KSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDEFEDNFGSNQVFWVLKERELTPSNANILDGRYAVFGYVTEKEGFLADVKVGDVIQSIQVVSGLEN 688 FVDLV++ FY+G+ R DGFV Q GDP+G G ++D +T++ R IPLEI V+ ++P Y L + LP G +AMAR + D+ S+Q ++ L + LDG YAVFGYVT+ + +K GD IQS +V++G N Sbjct: 93 FVDLVEQGFYNGLTFHRVVDGFVAQGGDPKGDGTGGYVDKNTQRPRNIPLEIKVDPAVENAPETPVYSRALGNQAGFPVM--LPHKT-GAVAMARSQMPDS-ASSQFYFTLSDE------TGFLDGDYAVFGYVTQGMDVVLKIKQGDKIQSAKVITGQNN 243 The following BLAST results are available for this feature:
BLAST of CX671862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671862 ID=CX671862; Name=CX671862; organism=Citrus sinensis; type=EST; length=690bpback to top |