CX671861

Overview
NameCX671861
Unique NameCX671861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5104 contig Csv1_Contig5104:172..1014. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: APMAP_RAT (Adipocyte plasma membrane-associated protein OS=Rattus norvegicus GN=Apmap PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.870e-29
Identity = 77/225 (34.22%), Postives = 125/225 (55.56%), Query Frame = -2
Query:  189 VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 839
            + G K+ F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS +ED+V+V E+   R R+ ++ G  KG  + F EN+PG PDNI  +  G +W+A   + A      +  L+    IK ++    KLFS+   +      + ++ V++ G   R+L DP GQ++++V+   + D +LY+ S  S FI ++ L
Sbjct:  152 IEGKKMSFVNDLTITRDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETAMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIF---KLFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFICRLSL 373          
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: APMAP_BOVIN (Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.442e-29
Identity = 74/225 (32.89%), Postives = 127/225 (56.44%), Query Frame = -2
Query:  189 VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 839
            + G K+ F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS  ED+V+V E    R R++++ G  KG  + F ENLPG PDNI  +  G +W+++  + A      +  L+    +K V+    KLFS+   +      + ++ +++ GT +R+L DP GQ++++V+   +   HLY+ S  + ++ +++L
Sbjct:  191 IEGRKMSFLNDLTVTRDGRKIYFTDSSSKWQRRDYLLLLMEGTDDGRLLEYDTQTKEVKVLLDHLRFPNGVQLSPAEDFVLVVELAMVRIRRFYVSGLMKGGADVFVENLPGFPDNIRASSSGGYWVSMAAIRANPGFSMLDFLSERPFLKKVIF---KLFSQETVMKFVPRYSLVLELSDSGTFLRSLHDPEGQVVTYVSEAHEHSGHLYLGSFRAPYLCRLRL 412          
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: APMAP_MOUSE (Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.281e-29
Identity = 75/225 (33.33%), Postives = 124/225 (55.11%), Query Frame = -2
Query:  189 VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 839
            + G K+ F ND+    DG  +YFT SSSK+   +Y L ++E    G+LL+YD  +    ++ D   F NGV LS +ED+V+V E+   R R+ ++ G  KG  + F EN+PG PDNI  +  G +W+A   + A      +  L+    IK ++    K+FS+   +      + ++ V++ G   R+L DP GQ++++V+   + D +LY+ S  S FI ++ L
Sbjct:  191 IEGKKMSFVNDLTVTRDGRKIYFTDSSSKWQRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIF---KMFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFICRLSL 412          
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.899e-27
Identity = 74/224 (33.04%), Postives = 122/224 (54.46%), Query Frame = -2
Query:  189 VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFIT--LGGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 839
            + G KL F ND+    DG  +YFT SSSK+   ++   ++EG   G+LL+YD  +    ++  G  F NGV LS  ED+V+V E+   R R+Y++ G  KG  + F EN+PG PDNI L+  G +W+A+  +        +  L+    IK ++  +  L    +T  L   + ++ ++E G+  R+  DPTG  + +V+   + + +LY+ S  S FI ++ L
Sbjct:  191 IEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFLVMEGTDDGRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLETAMARIRRYYVSGLMKGGADMFVENMPGLPDNIRLSSSGGYWVAMPVVRPNPGFSMLDFLSEKPWIKRMI--FKLLSQETVTKLLPKRSLVVELSETGSYRRSFHDPTGLTVPYVSEAHEHNGYLYLGSFRSPFICRLNL 412          
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.651e-27
Identity = 74/226 (32.74%), Postives = 123/226 (54.42%), Query Frame = -2
Query:  186 VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQLS 839
            V G +L F ND+    DG  +YFT SSS++   +Y   I+E    G++L+YD  +   T++ +   FANG+ L  DE+ V+V E+   R R+  + G  KG ++TF +NLPG PDNI  +  G +W+A+  +        +  L+    IK ++    KLFS+ + +      + +I + E G  +R+  DP G + ++V+   + D HLY+ S  S ++ K+ LS
Sbjct:  192 VGGRRLSFVNDLDVTQDGRKVYFTDSSSRWQRRDYLHLIMEATADGRVLEYDTETKEVTVLMENLRFANGIQLFPDEESVLVAETTMARIRRVHVSGLNKGGMDTFVDNLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQKPWIKKLIF---KLFSQDVLMKFVPRYSLVIELQESGACMRSFHDPHGMVAAYVSEAHEHDGHLYLGSFRSPYLCKLDLS 414          
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: APMAP_HUMAN (Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.631e-26
Identity = 71/225 (31.56%), Postives = 120/225 (53.33%), Query Frame = -2
Query:  189 VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 839
            + G  + F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS  ED+V+V E+   R R+ ++ G  KG  + F EN+PG PDNI  +  G +W+ +  +        +  L+    IK ++    KLFS+   +      + ++ +++ G   R+L DP G + ++++   + D HLY+ S  S F+ ++ L
Sbjct:  192 IEGKNMSFVNDLTVTQDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMPGFPDNIRPSSSGGYWVGMSTIRPNPGFSMLDFLSERPWIKRMIF---KLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDGLVATYISEVHEHDGHLYLGSFRSPFLCRLSL 413          
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.174e-23
Identity = 68/226 (30.09%), Postives = 119/226 (52.65%), Query Frame = -2
Query:  186 VNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQLS 839
            + G +L F ND+    DG  +YFT SSS++   ++   I+E    G++L+YD  +    ++ +   F NG+ L  DE+ V+V E+   R ++  + G  KG ++TF ENLPG PDNI  +  G +W+A+  +        +  L+    +K ++    KLFS+   L      + ++ +  DGT +R+  DP G + ++ +   +   HLY+ S  S ++ K+ LS
Sbjct:  191 IAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHLIMEATADGRVLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAETTMARIKRVHVSGLNKGGMDTFIENLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQRPWLKKLIF---KLFSQDTLLKFVPRYSLVVELQSDGTCVRSFHDPQGLVSAYSSEAHEYSGHLYLGSFRSPYLCKLDLS 413          
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: STS1_ARATH (Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.786e-14
Identity = 42/131 (32.06%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  453 VNGSKLRFANDV-VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNI-NLAPDGTFWIAII 839
            V+G   +F + + V+ + G +YFT  SS++ P +  + +      G+L KYDPS+ + T++ +G   + G A+S D  +V+V +  K   ++YW+KG + G  E F  ++   PDNI  +   G FW+A +
Sbjct:  137 VDGKPFKFLDGLDVDPTTGVVYFTSFSSRFSPIQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLVSQFTKSNIKRYWIKGPKAGSSEDFTNSVSN-PDNIKRIGSTGNFWVASV 266          
BLAST of CX671861 vs. ExPASy Swiss-Prot
Match: STS3_ARATH (Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.140e-13
Identity = 41/131 (31.30%), Postives = 68/131 (51.91%), Query Frame = -2
Query:  453 VNGSKLRFANDV-VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNI-NLAPDGTFWIAII 839
            V G    F + + V+ + G +YFT  SS + P +    +      G+  KYDPS  + T++ +G   + G A+S D  +V+V +  K   ++YW+KG + G  E F  ++   PDNI  +   G FW+A +
Sbjct:  139 VGGKPFLFLDGLDVDPTTGVVYFTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDGSFVLVGQFTKSNIKRYWIKGSKAGTSEDFTNSVSN-PDNIKRIGSTGNFWVASV 268          
The following BLAST results are available for this feature:
BLAST of CX671861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
APMAP_RAT1.870e-2934.22Adipocyte plasma membrane-associated protein OS=Ra... [more]
APMAP_BOVIN2.442e-2932.89Adipocyte plasma membrane-associated protein OS=Bo... [more]
APMAP_MOUSE9.281e-2933.33Adipocyte plasma membrane-associated protein OS=Mu... [more]
APMAP_CHICK3.899e-2733.04Adipocyte plasma membrane-associated protein OS=Ga... [more]
APMAP_SALSA6.651e-2732.74Adipocyte plasma membrane-associated protein OS=Sa... [more]
APMAP_HUMAN5.631e-2631.56Adipocyte plasma membrane-associated protein OS=Ho... [more]
APMAP_DANRE1.174e-2330.09Adipocyte plasma membrane-associated protein OS=Da... [more]
STS1_ARATH3.786e-1432.06Strictosidine synthase 1 OS=Arabidopsis thaliana G... [more]
STS3_ARATH7.140e-1331.30Strictosidine synthase 3 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13E12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13E12-I23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671861 ID=CX671861; Name=CX671861; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTGAGTTCACTATTTATTATTAAGGGCAATCCTCCGCTA
TTATCAAGATTAGTCACTACACCCATTCAACAGGGTTATAAGAACATAAA
CACACCTTAATACTGATTTAATCAATTCGGGAACAGAGTTTTCCCTGAGG
AAACCATTTTCTCTCGACACAAGTTATGCAGCTTAACTCAGTTGCACTTT
CCCTATGAAGTTAGAGGTGAGGCTAATCATGTAGAGATGATCATCAACCT
GCAAGCCTGAGGTCACAAACGACATCAACTGTCCGGTAGGATCAACAAGA
TTTCTGATTATAGTGCCATCTTCTGCAACATTTATTAAGTGTGCTCCGCC
GCCTAAGGTGATGAATCGAGAGAACAGTTTCGGATATGCTGCTAGAACAT
GTTTGATTAGCTTGGAACTGTTTAAAACCTTCATCCTCCTAGCATCCAAC
TTTATTATTGCAATCCAAAATGTGCCATCTGGGGCAAGGTTGATGTTATC
AGGTGCACCTGGTAGGTTTTCAGCGAAAGTTTCTAATTTCCCTTTACGCT
CGCCCTTCAGCCAATACTTACGGCACCTGAATTTCCATGATTCACAAACA
ACAACATAATCTTCATCTCTTGAGAGTGCAACGCCATTAGCAAAGTAGAA
ACCATCAGCCACAAGTGTTGTTATATTGGATGAAGGATCATACTTGAGTA
GCTGACCATGAGGTTTCCCCTCAAGAATATCCAGGCAATACTCGTGGGGT
AAATATTTGGAGCTTGATACAGTAAAATATAAACTACCATCTGATGCTTC
AACTACATCATTTGCAAACCTCAGTTTAGAACCATTGACGTAT
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