CX671860

Overview
NameCX671860
Unique NameCX671860
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5104 contig Csv1_Contig5104:1..934. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: APMAP_RAT (Adipocyte plasma membrane-associated protein OS=Rattus norvegicus GN=Apmap PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.526e-30
Identity = 87/264 (32.95%), Postives = 141/264 (53.41%), Query Frame = 2
Query:   74 VGLTSTKEGHLIICDNANGLHKVSED--GVENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 826
            +G+     G L + D   GL +V+     V+  LS    + G K+ F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS +ED+V+V E+   R R+ ++ G  KG  + F EN+PG PDNI  +  G +W+A   + A      +  L+    IK ++    KLFS+   +      + ++ V++ G   R+L DP GQ++++V+   + D +LY+ S  S FI ++ L
Sbjct:  113 LGIRVGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTITRDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETAMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIF---KLFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFICRLSL 373          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: APMAP_BOVIN (Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.526e-30
Identity = 84/264 (31.82%), Postives = 145/264 (54.92%), Query Frame = 2
Query:   74 VGLTSTKEGHLIICDNANGLHKVS--EDGVENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 826
            +G+ +   G L + D   GL +V+  +  V+  LS    + G K+ F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS  ED+V+V E    R R++++ G  KG  + F ENLPG PDNI  +  G +W+++  + A      +  L+    +K V+    KLFS+   +      + ++ +++ GT +R+L DP GQ++++V+   +   HLY+ S  + ++ +++L
Sbjct:  152 LGIRAGPNGTLFVVDAYKGLFEVNPWKREVKLLLSSETPIEGRKMSFLNDLTVTRDGRKIYFTDSSSKWQRRDYLLLLMEGTDDGRLLEYDTQTKEVKVLLDHLRFPNGVQLSPAEDFVLVVELAMVRIRRFYVSGLMKGGADVFVENLPGFPDNIRASSSGGYWVSMAAIRANPGFSMLDFLSERPFLKKVIF---KLFSQETVMKFVPRYSLVLELSDSGTFLRSLHDPEGQVVTYVSEAHEHSGHLYLGSFRAPYLCRLRL 412          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: APMAP_MOUSE (Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.399e-30
Identity = 85/264 (32.20%), Postives = 141/264 (53.41%), Query Frame = 2
Query:   74 VGLTSTKEGHLIICDNANGLHKVSED--GVENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 826
            +G+ +   G L + D   GL +V+     V+  LS    + G K+ F ND+    DG  +YFT SSSK+   +Y L ++E    G+LL+YD  +    ++ D   F NGV LS +ED+V+V E+   R R+ ++ G  KG  + F EN+PG PDNI  +  G +W+A   + A      +  L+    IK ++    K+FS+   +      + ++ V++ G   R+L DP GQ++++V+   + D +LY+ S  S FI ++ L
Sbjct:  152 LGIRAGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTVTRDGRKIYFTDSSSKWQRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAATIRANPGFSMLDFLSDKPFIKRMIF---KMFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSEAHEHDGYLYLGSFRSPFICRLSL 412          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: APMAP_SALSA (Adipocyte plasma membrane-associated protein OS=Salmo salar GN=apmap PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.865e-28
Identity = 85/265 (32.08%), Postives = 139/265 (52.45%), Query Frame = 2
Query:   74 VGLTSTKEGHLIICDNANGLHKVSE--DGVENFLS---YVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQLS 829
            +G+     G L + D   GL KV+     V N +S    V G +L F ND+    DG  +YFT SSS++   +Y   I+E    G++L+YD  +   T++ +   FANG+ L  DE+ V+V E+   R R+  + G  KG ++TF +NLPG PDNI  +  G +W+A+  +        +  L+    IK ++    KLFS+ + +      + +I + E G  +R+  DP G + ++V+   + D HLY+ S  S ++ K+ LS
Sbjct:  153 LGIRVGPNGTLFVADAYLGLFKVNPVTGEVTNLVSAGQMVGGRRLSFVNDLDVTQDGRKVYFTDSSSRWQRRDYLHLIMEATADGRVLEYDTETKEVTVLMENLRFANGIQLFPDEESVLVAETTMARIRRVHVSGLNKGGMDTFVDNLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQKPWIKKLIF---KLFSQDVLMKFVPRYSLVIELQESGACMRSFHDPHGMVAAYVSEAHEHDGHLYLGSFRSPYLCKLDLS 414          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.086e-28
Identity = 81/263 (30.80%), Postives = 137/263 (52.09%), Query Frame = 2
Query:   74 VGLTSTKEGHLIICDNANGLHKVSEDGVENFL-----SYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFIT--LGGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 826
            +G+       L + D   GL++V+    E  +     + + G KL F ND+    DG  +YFT SSSK+   ++   ++EG   G+LL+YD  +    ++  G  F NGV LS  ED+V+V E+   R R+Y++ G  KG  + F EN+PG PDNI L+  G +W+A+  +        +  L+    IK ++  +  L    +T  L   + ++ ++E G+  R+  DPTG  + +V+   + + +LY+ S  S FI ++ L
Sbjct:  152 LGIRVGPNNTLFVADAYYGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFLVMEGTDDGRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLETAMARIRRYYVSGLMKGGADMFVENMPGLPDNIRLSSSGGYWVAMPVVRPNPGFSMLDFLSEKPWIKRMI--FKLLSQETVTKLLPKRSLVVELSETGSYRRSFHDPTGLTVPYVSEAHEHNGYLYLGSFRSPFICRLNL 412          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: APMAP_HUMAN (Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.693e-27
Identity = 81/264 (30.68%), Postives = 138/264 (52.27%), Query Frame = 2
Query:   74 VGLTSTKEGHLIICDNANGLHKVS--EDGVENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQL 826
            +G+ +   G L + D   GL +V+  +  V+  LS    + G  + F ND+    DG  +YFT SSSK+   +Y L ++EG   G+LL+YD  +    ++ D   F NGV LS  ED+V+V E+   R R+ ++ G  KG  + F EN+PG PDNI  +  G +W+ +  +        +  L+    IK ++    KLFS+   +      + ++ +++ G   R+L DP G + ++++   + D HLY+ S  S F+ ++ L
Sbjct:  153 LGIRAGPNGTLFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTVTQDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTREVKVLLDQLRFPNGVQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMPGFPDNIRPSSSGGYWVGMSTIRPNPGFSMLDFLSERPWIKRMIF---KLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDGLVATYISEVHEHDGHLYLGSFRSPFLCRLSL 413          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: APMAP_DANRE (Adipocyte plasma membrane-associated protein OS=Danio rerio GN=apmap PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.787e-24
Identity = 77/265 (29.06%), Postives = 136/265 (51.32%), Query Frame = 2
Query:   74 VGLTSTKEGHLIICDNANGLHKVSE--DGVENFLSY---VNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR----RMKVLNSSKLIKHVLAAYPKLFSRFITL---GGGAHLINVAEDGTIIRNLVDPTGQLMSFVTSGLQVDDHLYMISLTSNFIGKVQLS 829
            +G+     G L + D   GL +V+     V++ +S    + G +L F ND+    DG  +YFT SSS++   ++   I+E    G++L+YD  +    ++ +   F NG+ L  DE+ V+V E+   R ++  + G  KG ++TF ENLPG PDNI  +  G +W+A+  +        +  L+    +K ++    KLFS+   L      + ++ +  DGT +R+  DP G + ++ +   +   HLY+ S  S ++ K+ LS
Sbjct:  152 LGIRVGPNGTLFVADAYLGLFEVNPVTGEVKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDSSSRWQRRDFMHLIMEATADGRVLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAETTMARIKRVHVSGLNKGGMDTFIENLPGFPDNIRRSSSGGYWVAMSAVRPNPGFSMLDFLSQRPWLKKLIF---KLFSQDTLLKFVPRYSLVVELQSDGTCVRSFHDPQGLVSAYSSEAHEYSGHLYLGSFRSPYLCKLDLS 413          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: STS1_ARATH (Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17
Identity = 51/161 (31.68%), Postives = 85/161 (52.80%), Query Frame = 2
Query:   92 KEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDV-VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNI-NLAPDGTFWIAII 562
            K G L + D   GLH +S  G         V+G   +F + + V+ + G +YFT  SS++ P +  + +      G+L KYDPS+ + T++ +G   + G A+S D  +V+V +  K   ++YW+KG + G  E F  ++   PDNI  +   G FW+A +
Sbjct:  107 KTGDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVYFTSFSSRFSPIQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLVSQFTKSNIKRYWIKGPKAGSSEDFTNSVSN-PDNIKRIGSTGNFWVASV 266          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: STS3_ARATH (Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.254e-16
Identity = 51/163 (31.29%), Postives = 82/163 (50.31%), Query Frame = 2
Query:   86 STKEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDV-VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNI-NLAPDGTFWIAII 562
            +TK G L + D A GLH +   G   +     V G    F + + V+ + G +YFT  SS + P +    +      G+  KYDPS  + T++ +G   + G A+S D  +V+V +  K   ++YW+KG + G  E F  ++   PDNI  +   G FW+A +
Sbjct:  107 NTKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTGVVYFTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDGSFVLVGQFTKSNIKRYWIKGSKAGTSEDFTNSVSN-PDNIKRIGSTGNFWVASV 268          
BLAST of CX671860 vs. ExPASy Swiss-Prot
Match: STSY_CATRO (Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.871e-11
Identity = 54/160 (33.75%), Postives = 76/160 (47.50%), Query Frame = 2
Query:   92 KEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDV-VEASDGSLYFT-VSSSKYLPHEYCLDILEGKPH-GQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIA 556
            K   + I D    L  V ++G       + V G   ++   V V+   G +YFT VSS      E   +I+      G+L+KYDPS+  TTL+    +   G  +S D  +VVV E    R  KYWL+G +KG  E F   +P  P NI    DG FW++
Sbjct:  116 KNSQMYIVDGHYHLCVVGKEGGYATQLATSVQGVPFKWLYAVTVDQRTGIVYFTDVSSIHDDSPEGVEEIMNTSDRTGRLMKYDPSTKETTLLLKELHVPGGAEISADGSFVVVAEFLSNRIVKYWLEGPKKGSAE-FLVTIPN-PGNIKRNSDGHFWVS 273          
The following BLAST results are available for this feature:
BLAST of CX671860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
APMAP_RAT1.526e-3032.95Adipocyte plasma membrane-associated protein OS=Ra... [more]
APMAP_BOVIN1.526e-3031.82Adipocyte plasma membrane-associated protein OS=Bo... [more]
APMAP_MOUSE3.399e-3032.20Adipocyte plasma membrane-associated protein OS=Mu... [more]
APMAP_SALSA1.865e-2832.08Adipocyte plasma membrane-associated protein OS=Sa... [more]
APMAP_CHICK7.086e-2830.80Adipocyte plasma membrane-associated protein OS=Ga... [more]
APMAP_HUMAN2.693e-2730.68Adipocyte plasma membrane-associated protein OS=Ho... [more]
APMAP_DANRE2.787e-2429.06Adipocyte plasma membrane-associated protein OS=Da... [more]
STS1_ARATH7.350e-1731.68Strictosidine synthase 1 OS=Arabidopsis thaliana G... [more]
STS3_ARATH1.254e-1631.29Strictosidine synthase 3 OS=Arabidopsis thaliana G... [more]
STSY_CATRO7.871e-1133.75Strictosidine synthase OS=Catharanthus roseus GN=S... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13E12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13E12-I23-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671860 ID=CX671860; Name=CX671860; organism=Citrus sinensis; type=EST; length=934bp
AAGAGATGGTTGGATCAAGAGATTGCAAGATGGAACTTGGGTCAATTGGA
AATTTATTGACAGTCAAACTCTAGTTGGACTTACATCGACCAAAGAAGGC
CATCTAATTATATGCGACAACGCAAACGGTTTGCACAAGGTCAGCGAAGA
CGGCGTAGAGAACTTTTTATCATACGTCAATGGTTCTAAACTGAGGTTTG
CAAATGATGTAGTTGAAGCATCAGATGGTAGTTTATATTTTACTGTATCA
AGCTCCAAATATTTACCCCACGAGTATTGCCTGGATATTCTTGAGGGGAA
ACCTCATGGTCAGCTACTCAAGTATGATCCTTCATCCAATATAACAACAC
TTGTGGCTGATGGTTTCTACTTTGCTAATGGCGTTGCACTCTCAAGAGAT
GAAGATTATGTTGTTGTTTGTGAATCATGGAAATTCAGGTGCCGTAAGTA
TTGGCTGAAGGGCGAGCGTAAAGGGAAATTAGAAACTTTCGCTGAAAACC
TACCAGGTGCACCTGATAACATCAACCTTGCCCCAGATGGCACATTTTGG
ATTGCAATAATAAAGTTGGATGCTAGGAGGATGAAGGTTTTAAACAGTTC
CAAGCTAATCAAACATGTTCTAGCAGCATATCCGAAACTGTTCTCTCGAT
TCATCACCTTAGGCGGCGGAGCACACTTAATAAATGTTGCAGAAGATGGC
ACTATAATCAGAAATCTTGTTGATCCTACCGGACAGTTGATGTCGTTTGT
GACCTCAGGCTTGCAGGTTGATGATCATCTCTACATGATTAGCCTCACCT
CTAACTTCATAGGGAAAGTGCAACTGAGTTAAGCTGCATAACTTGTGTCG
AGAGAAAATGGTTTCCTCAGGGAAAACTCTGTTCCCGAATTGATTAAATC
AGTATTAGGGTGTGTTTATGTTCTTATAACCCTG
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