CX671846

Overview
NameCX671846
Unique NameCX671846
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671846 vs. ExPASy Swiss-Prot
Match: Y4757_DICDI (OTU domain-containing protein DDB_G0284757 OS=Dictyostelium discoideum GN=DDB_G0284757 PE=4 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.033e-19
Identity = 58/159 (36.48%), Postives = 87/159 (54.72%), Query Frame = -2 
Query:  254 IPNMNDASLDHQRLLQRLNVYSLYEVK-VSGDGNCQFRALSDQMYKSPEYHKHVRKEVVK--------QLKDCRSMYEGYVPMKYKRYYKNMAKVGEWGDHVTLQAAADKFAAKICLLTSF--RDTCFIEIMPQHQAPKRELWLSFWSEVHYNSLYDIR 697
            +P   +  +  QRL +RL +Y L   K + GDGNCQ  ALSDQ+Y    + + VRK +V         QL +  ++ +      +  Y  +M+K G WGDH+TL AAA+ F +KI +++S   +   FIEI+P      + L LS ++E HY SL  +R
Sbjct:  608 LPQSKEVQIAQQRLNERLELYMLKNSKEIPGDGNCQMHALSDQLYGDLSHSQEVRKTIVDWLRKNKDFQLPNGATICQFVNTNNWDDYCNDMSKNGNWGDHLTLLAAAEHFGSKISIISSVESQSNFFIEIIPSKILNDKVLLLSHYAEFHYGSLCPLR 766
The following BLAST results are available for this feature:
BLAST of CX671846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4757_DICDI1.033e-1936.48OTU domain-containing protein DDB_G0284757 OS=Dict... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13E03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13E03-I5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671846 ID=CX671846; Name=CX671846; organism=Citrus sinensis; type=EST; length=719bp
TTTTTTTTAATGAGGGCAAAATCACTTCTATAGAATATAAAATGATTAAT
ATGATACATCTTGATGGATCTGGACCCATCTATATTGGTAAAGTAACTAT
CGCCAAAAAATAGAAGCAAAAATGTATTTTTAAAAAATTAAAAAATAGAA
GATATAGCATGACAGCAAATGACAAATATACAGAGTATAAAACTATCTGC
TTCCACTAGAACAACCAATGTTTCTTCCTCGGTTTCTTTGGAACTGGTGC
ATCTCGAATATCGTATAGTGAGTTATAATGTACCTCTGACCAGAAGCTTA
ACCACAACTCGCGTTTAGGAGCCTGGTGTTGTGGCATAATTTCAATAAAA
CAAGTATCTCTGAATGATGTCAAAAGACATATCTTTGCAGCAAACTTATC
GGCTGCTGCTTGTAATGTAACGTGGTCCCCCCATTCACCAACTTTTGCCA
TGTTTTTGTAATAGCGTTTATATTTCATCGGGACATAGCCTTCATACATA
GAGCGGCAGTCTTTGAGCTGTTTTACAACCTCTTTCCGGACATGCTTGTG
ATACTCAGGTGACTTGTACATCTGATCTGAAAGTGCACGAAACTGACAAT
TTCCATCCCCAGAGACTTTCACCTCATATAGACTATAAACATTTAGCCTC
TGGAGAAGCCGCTGGTGATCCAAACTGGCATCATTCATGTTGGGGATATA
GGAGTTTATCTTTGGGACA
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