CX671836

Overview
NameCX671836
Unique NameCX671836
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671836 vs. ExPASy Swiss-Prot
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 47/118 (39.83%), Postives = 57/118 (48.31%), Query Frame = -1 
Query:  154 LMTNYASGQLDNVSL-PEGKTVEILPARKADEGGAKVEEAEE-------LDLTPRLFGVSIGAKRARR------XXXXXXXXXXXXXXXXQPGSDVKSEPLDANNDHHQEPPWLELGK 465
            LM N+  GQ D   L PEGK +++LP R+         E E         DLTPRLFGVSIG KRARR                      +  SDVK+EP++ NN  +    WLELGK
Sbjct:  260 LMANFTPGQEDCAHLLPEGKPLDLLPERQEMSEAIMASEIETGIGLKLGEDLTPRLFGVSIGVKRARREEELGAAEEEDDDRREAAAQEGEQSSDVKAEPMEENNSGNHNGSWLELGK 377
The following BLAST results are available for this feature:
BLAST of CX671836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
HFB2B_ARATH2.437e-1139.83Heat stress transcription factor B-2b OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13D09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13D09-G17-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671836 ID=CX671836; Name=CX671836; organism=Citrus sinensis; type=EST; length=870bp
TCCGCACTCCTTTCACATCCCCACCTTCCTCGGATCAAAAAGCGCTTGCC
TTTTAATAAGCAAACAATTTGACCGGATCCGCACATATCATCACGTGGCC
CCATCACCACGTGCACCAACCATATTAATCCATATCGCCGTCAGTTCTCA
CGATTTACCCAGTTCTAGCCAAGGAGGTTCCTGATGATGATCATTATTCG
CATCCAACGGCTCTGATTTAACATCCGACCCCGGCTGATTCTCACCTTGC
TGTTGCTGCAGTTGATTCTTCTCTTCTTCCTCTTCTCTCCTCGCACGCTT
CGCCCCAATCGACACACCAAACAACCTCGGAGTCAGATCCAACTCCTCCG
CCTCCTCCACCTTCGCGCCGCCTTCATCGGCCTTCCTCGCCGGCAGTATC
TCCACCGTCTTCCCCTCCGGCAGACTTACGTTGTCCAGCTGACCGGAAGC
GTAATTCGTCATTAAAGCGACTCCGGCATCGTCGTACAACTCGTAGTTCT
AATCACGGTCGTAGTCGGCACCGCCACCGGCGACGAATTAGCTGATATCA
CCTGTTCCAGCCGGAGTTCGCCGGCGAAATCTACCGTGCAACCGCAGCGA
CCGTCACAGTCCCCGCTGTGGCAGCTGTGAACCAGAACAGGGAAACAAGA
TGCAGCAGAGAAAATCAACTGCGTCGGGGCGGCCATCTGGCACCGACGGA
TCTGATTTTTCGTATCGGATGGTCGTCGATTCCCGTAAGTTTTCATTTTT
ATGATAACAGGATCATAAATTCAGTATATGCATTTGATTTGTTGGTAAAA
TTTAACAACAGGATACACAAAGGTGGCTAGAGGGAAGTCTCGTCTCTCTA
AACTCATTTTCGCTCAGGCT
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