CX671780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 3.533e-74 Identity = 122/146 (83.56%), Postives = 132/146 (90.41%), Query Frame = -1 Query: 446 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSR 883 +VQC HMCPIRVHWHVK NY+EYWRVKITITNFNY +NY+ WNLV QHPN DN+TQ+FSF YKSLTPY GLNDTAMLWG+KFYNDFLSEAG GNVQSE+LFRKD STFTFEKGWAFPRRIYFNGDNCVMPPPD+YP+LPN SR Sbjct: 290 LVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFSFNYKSLTPYAGLNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPFLPNGGSR 435
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.485e-72 Identity = 118/146 (80.82%), Postives = 131/146 (89.73%), Query Frame = -1 Query: 446 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSR 883 +VQC SHMCPIRVHWHVK+NY+EYWRVKIT+TNFNY MNYS WNLV QHP+FDNLT +FSF YKSL PY +NDTAMLWGIK+YND L AG +GNVQSELLF+KD +FTFEKGWAFPRR+YFNGDNCVMPPPDAYPWLPNAS+R Sbjct: 278 LVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQHPSFDNLTTIFSFNYKSLNPYGVINDTAMLWGIKYYNDLLMTAGPDGNVQSELLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWLPNASTR 423
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.641e-71 Identity = 115/145 (79.31%), Postives = 128/145 (88.28%), Query Frame = -1 Query: 449 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASS 883 +VQC HMCP+R+HWHVK+NY++YWRVK+TITNFNY MNYS WNLVVQHPNFDNLTQ FSF YK LTPY +NDT +LWGIKFYND L +AG GNVQSELLF+K+AS FTFEKGWAFPRRIYFNGDNCVMPPPD+YPWLPN S Sbjct: 285 LVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNTGS 429
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2) HSP 1 Score: 267.314 bits (682), Expect = 8.146e-71 Identity = 117/144 (81.25%), Postives = 128/144 (88.89%), Query Frame = -1 Query: 452 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 883 ++QC HMCPIRVHWHVK +Y+EYWRVK+ ITNFNY MNYS WNLVVQHPNFDNLT+LFSF YK L PY +NDTAMLWGIKFYNDFLS+AG GNVQSELLF+K+ FTFEKGWAFPRRIYFNGDNCVMPPPD+YPWLPNAS Sbjct: 276 LLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDNLTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNAS 419
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 2.006e-69 Identity = 114/145 (78.62%), Postives = 126/145 (86.90%), Query Frame = -1 Query: 452 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPY-EGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 883 +VQC SHMCPIR+HWHVKLNY+EYWRVKITITNFNY MNY+ WNLV QHPNF+N+TQLFSF YK LTPY +NDTAM WG+KFYND L +AG GN QSELL RKD+ FTF+KGWAFP R+YFNGDNCVMPPPDAYPWLPNAS Sbjct: 288 LVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVAQHPNFNNITQLFSFNYKPLTPYGSKINDTAMFWGVKFYNDLLMQAGPLGNAQSELLLRKDSKDFTFDKGWAFPHRVYFNGDNCVMPPPDAYPWLPNAS 432
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL2_ORYSJ (COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.438e-67 Identity = 110/145 (75.86%), Postives = 128/145 (88.28%), Query Frame = -1 Query: 449 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASS 883 +VQC HMCPIRVHWHVKLNYR+YWRVK+TITN+NY MNYS WNLVVQHPNF+N++ +FSF YKSL PY +NDTAM+WG+K+YND L AG +GNVQSELLFRKD STFTF+KGWAFPRRIYFNG++CVMP PD YPWLP +S+ Sbjct: 280 LVQCTPHMCPIRVHWHVKLNYRDYWRVKVTITNWNYRMNYSQWNLVVQHPNFENVSTVFSFNYKSLNPYGVINDTAMMWGVKYYNDLLMVAGPDGNVQSELLFRKDRSTFTFDKGWAFPRRIYFNGESCVMPSPDLYPWLPPSST 424
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSJ (COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 6.912e-62 Identity = 100/144 (69.44%), Postives = 120/144 (83.33%), Query Frame = -1 Query: 452 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 883 ++QC SHMCPIRVHWHVKLNY++YWR KI ITNFNY MNY+ W LV QHPN +N+T++FSF YK L PY +NDT M +G+KFYND L EAG GNVQSE+L RKD +TFTF +GWAFPR+IYFNGD C MPPPD+YP+LPN++ Sbjct: 302 LLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFSFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSA 445
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSI (COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 6.912e-62 Identity = 100/144 (69.44%), Postives = 120/144 (83.33%), Query Frame = -1 Query: 452 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 883 ++QC SHMCPIRVHWHVKLNY++YWR KI ITNFNY MNY+ W LV QHPN +N+T++FSF YK L PY +NDT M +G+KFYND L EAG GNVQSE+L RKD +TFTF +GWAFPR+IYFNGD C MPPPD+YP+LPN++ Sbjct: 302 LLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFSFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSA 445
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.179e-61 Identity = 99/144 (68.75%), Postives = 121/144 (84.03%), Query Frame = -1 Query: 452 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 883 ++QC +HMCP+RVHWHVKLNYREYWR KITI NFNY MNY+ W LV QHPN DN+T++FSF YK + Y +NDTAM +G+K++ND L EAG +GNVQSE+L RKDA TFTF +GWAFPR++YFNGD C MPPPD+YP+LPNA+ Sbjct: 285 LLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNFNYRMNYTGWTLVAQHPNLDNITEVFSFDYKPVVSYGSINDTAMFYGLKYFNDQLMEAGPHGNVQSEVLMRKDARTFTFRQGWAFPRKVYFNGDECQMPPPDSYPYLPNAA 428
BLAST of CX671780 vs. ExPASy Swiss-Prot
Match: COBL4_ARATH (COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 1.304e-60 Identity = 94/144 (65.28%), Postives = 122/144 (84.72%), Query Frame = -1 Query: 452 MVQCPSHMCPIRVHWHVKLNYREYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAS 883 ++QC HMCP+RVHWHVK NY++YWRVKI ITNFNY MN++LW L +QHPN +N+TQ+FSF YK ++PY +NDT M +G KFYND L EAG +GNVQSE+L +KD TFTF++GWAFPR++YFNGD C++PPPD+YP+LPN++ Sbjct: 268 LLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFSFDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSA 411 The following BLAST results are available for this feature:
BLAST of CX671780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671780 ID=CX671780; Name=CX671780; organism=Citrus sinensis; type=EST; length=883bpback to top |