CX671773

Overview
NameCX671773
Unique NameCX671773
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671773 vs. ExPASy Swiss-Prot
Match: YCV6_SCHPO (Putative hydrolase C777.06c OS=Schizosaccharomyces pombe GN=SPCC777.06c PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 8.457e-19
Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 3 
Query:  351 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEP-GNKNRRLNTSILIRYPGPSGRR--NILIDAGKFFYHSALRWF 578
            S+++FMGTG S GIP V CLT     C  C  ++ P G KN R NTS+L++    SG R  NILID GK FY SAL+ F
Sbjct:    6 SKLLFMGTGCSSGIPNVCCLTLEKPTCRTCLASLTPEGRKNNRFNTSVLLQVDDGSGDRPKNILIDCGKHFYVSALKHF 84

HSP 2 Score: 39.2762 bits (90), Expect = 8.457e-19
Identity = 17/59 (28.81%), Postives = 34/59 (57.63%), Query Frame = 1 
Query:  589 GLDDLRDWTNN-VQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEE 762
            G+DDLR+WT   +Q  + IY+  R ++V++++  Y+V+      G +V    F++   +
Sbjct:  107 GMDDLREWTLGFLQPSVKIYLTERTYKVIERSFPYMVNAKNATGGGSVPTFDFHVFSPD 165
The following BLAST results are available for this feature:
BLAST of CX671773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCV6_SCHPO8.457e-1951.90Putative hydrolase C777.06c OS=Schizosaccharomyces... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_13A12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A12-A23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671773 ID=CX671773; Name=CX671773; organism=Citrus sinensis; type=EST; length=762bp
CGGTTTTCCAGAGTCTCCCGAGTTCTTCACTTTCCTCAAAATGCCCTTTC
AGAACCCTAAAAAAGCCGAAAAAGTTCAAAAAGTAAAAAGTTATGAGACA
ATTTTTTAAAAAAATCTGAAAAAAGAAGAAAAATTAGAACTTTCTGTCAA
TGGCATCATTTTTAGGCACGGTGAGGCCAAGCCCATCCTCAGTGTCCTGT
TTTGCTCCTTGCAGACGCCAAATATCGGTTTACACCTCTCAAATTTCACT
CCCAACATCTGGGTTCTTTCCTTTCAAGAGGATTCTTCAAGCTTGCCTTC
AATCTAATTTGGCAAATGGGGATAATGGAGTGCAGTTACCTGCTCAGCAA
TCTGAAATTGTATTTATGGGGACAGGAACTAGTGAAGGGATTCCTCGTGT
CAGCTGTCTAACTAATCCTTCAAAAAAATGCCCGGTGTGCACAAAAGCTG
TCGAACCTGGTAATAAAAATAGGAGACTCAACACAAGTATCCTTATTCGT
TATCCTGGGCCATCTGGAAGGAGAAACATTTTAATAGATGCTGGCAAGTT
TTTCTACCATAGCGCTCTTCGTTGGTTTCCTGCCTATGGGTTTGGATGAT
CTTCGAGACTGGACGAACAATGTACAGCGTCACATTCCAATTTACGTTGC
AATGCGTGATTTTGAGGTAATGAAGAAGACTCATTATTATTTAGTGGATA
CAAGCGGGATTATACCTGGTGCTGCAGTTTCAGAGCTGCAATTTAATATC
ATTGATGAGGAG
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