CX671748

Overview
NameCX671748
Unique NameCX671748
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5092 contig Csv1_Contig5092:1..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_HUMAN (Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.299e-38
Identity = 83/211 (39.34%), Postives = 130/211 (61.61%), Query Frame = 2
Query:  164 MAKTKEKKVNVSGKPKHSLDANRTDGKSGS--RSASTVRRLNMYKTRPKRDRKGKVLQH-EFQSKELPNT--RIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQK--QARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWG 775
            M K K K  +     K S + +R  G  G   R  +T+RRLNMY+ + +R+ +GK+++  ++QS     T  R++P+ +WFGNTR + Q  L+ F+EE+ + M   Y V++++ KLP SLL+D  +    +VH+LDTE F+  FGPK +RKRP L ASD +SL++ A+ S ++++Q  D     E     G R+  +  +++KGQSKRIWG
Sbjct:    1 MVKPKYKGRSTINPSKASTNPDRVQGAGGQNMRDRATIRRLNMYRQKERRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYKVVMKQSKLPMSLLHDRIRPHNLKVHILDTESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDT---GVRNEAQEEIYKKGQSKRIWG 208          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_MOUSE (Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.334e-38
Identity = 84/211 (39.81%), Postives = 130/211 (61.61%), Query Frame = 2
Query:  164 MAKTKEKKVNVSGKPKHSLDANRTDGKSGS--RSASTVRRLNMYKTRPKRDRKGKVLQH-EFQSKELPNT--RIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQK--QARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIWG 775
            M K K K  +   +   S + +R  G  G   R   T+RRLNMY+ + +R+ +GKV++  ++QS     T  R++P+ +WFGNTR + Q  L+ F+EE+   M   Y V++++ KLP SLL+D  +   A+VH+LDTE F+  FGPK +RKRP L ASD +SL++ A+ S ++++Q  D       +E  G R+  +  +++KGQSKRIWG
Sbjct:    1 MVKPKYKGRSTINRSAASTNPDRVQGAGGQNMRDRGTIRRLNMYRQKERRNSRGKVIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQASLQKFQEEMDKVMKDPYKVVMKQSKLPMSLLHDRIQPHNAKVHILDTESFESTFGPKSQRKRPNLFASDMQSLLENAEMSTESYDQGKDRDLV---MEDTGVRNEAQEEIYKKGQSKRIWG 208          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_YARLI (Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica GN=NOG2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.965e-36
Identity = 81/183 (44.26%), Postives = 111/183 (60.66%), Query Frame = 2
Query:  230 RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIW 772
            R  G +  R A  V++L+MYK  R K + +G+ +Q   FQSKE+PN RI P+RRWFGNTR + Q  L  FRE L      SY V+LR+ KLP SLL ++ K  +V +++TE + + FGPK +RK+P+L   D+  L   AD SQ  FE K +   S    + DG+    +  +F KGQSKRIW
Sbjct:   25 RVKGVNFYRDAKKVKKLSMYKEGRAKHNARGEEVQAATFQSKEIPNARIDPNRRWFGNTRVIAQDALNHFREALGETKRDSYQVLLRQNKLPMSLLEENNKIPQVKVVETESYANTFGPKAQRKKPQLAVGDFAELASAADESQQDFEAKKEEDNS---WKVDGWSQEAKEAIFHKGQSKRIW 204          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_SCHPO (Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe GN=nog2 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.529e-35
Identity = 80/203 (39.41%), Postives = 119/203 (58.62%), Query Frame = 2
Query:  170 KTKEKKVNVSGKPKHSLDANRTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIW 772
            K ++ ++   G  +      R  G++  R+A  V R+NMY+  + K +  G++++  EFQS E+P  RIQPDRRWF NTR + Q  L  FRE +   ++  Y V+LR  KLP SLL ++ +  +V +L++EPF++ FGPK +RKRPK+       L K +D  Q+A+E+K +    A   E D      R  +F KGQSKRIW
Sbjct:    5 KKEKSRIGREGANEKKPGNLRVKGENFYRNAKDVARVNMYRGGKAKYNAAGELVRAAEFQSSEVPKARIQPDRRWFNNTRVIAQPTLTQFREAMGQKLNDPYQVLLRRNKLPMSLLQENTEIPKVRVLESEPFENTFGPKSQRKRPKISFDSVAELAKESDEKQNAYEEKIEERILANPDESDDVMLAARDAIFSKGQSKRIW 207          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_YEAST (Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae GN=NOG2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.869e-33
Identity = 79/190 (41.58%), Postives = 113/190 (59.47%), Query Frame = 2
Query:  230 RTDGKSGSRSASTVRRLNMYKTRPK-RDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLL--NDHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKN--DASTSAEGVEGD---GFRDLVRHTMFEKGQSKRIW 772
            R  G++  R +  V+ LNMY +  + R++KG +++   FQ   +P+ R+QPDRRWFGNTR ++Q  L+ FR  L      +Y V+LR  KLP SLL   D  +  +  +LDTE + DAFGPK +RKRP+L AS+ E LVK  +     +E+K   DA+    G + D   G+    +  +F KGQSKRIW
Sbjct:   23 RVKGENFYRDSKRVKFLNMYTSGKEIRNKKGNLIRAASFQDSTIPDARVQPDRRWFGNTRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEEKDADESPKARILDTESYADAFGPKAQRKRPRLAASNLEDLVKATNEDITKYEEKQVLDATLGLMGNQEDKENGWTSAAKEAIFSKGQSKRIW 212          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_KLULA (Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis GN=NOG2 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.439e-33
Identity = 81/208 (38.94%), Postives = 115/208 (55.29%), Query Frame = 2
Query:  176 KEKKVNVSGKPKHSLDAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS----AEGVEGDGFRDLVRHTMFEKGQSKRIW 772
            KEK+  +  +  ++ D N R  G++  R    V+ LNMYK  R  R+ KG +++    Q    P  R+ PDRRWFGNTR ++Q  L  FRE L  +   SY V+LR  KLP SLLN  D  +     +L+TEPF+  FGPK +RK+P++ AS  E L+         FE+K +  ++     +  E DG+    +  +F KGQSKRIW
Sbjct:    6 KEKQRRI--REGNTKDGNLRVKGENFYRDTKRVQFLNMYKGGRSVRNAKGDIIKAAPLQDTAAPTARVAPDRRWFGNTRVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKILETEPFEQTFGPKAQRKKPRIAASSLEELISSTSTDNKTFEEKQELDSTLGLMGKQEEEDGWTQAAKEAIFHKGQSKRIW 211          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_ASHGO (Nucleolar GTP-binding protein 2 OS=Ashbya gossypii GN=NOG2 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33
Identity = 80/211 (37.91%), Postives = 120/211 (56.87%), Query Frame = 2
Query:  167 AKTKEKKVNVSGKPKHSLDAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLL--NDHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS----AEGVEGDGFRDLVRHTMFEKGQSKRIW 772
            AK ++++    G  K   D N R  G++  R    V+ LNMYK  +  R+ KG +++    QS ++P  R+QPDRRWFGNTR ++Q  L+ FR+ L    + SY V+LR  KLP SLL   D  +     ++DTEP+   FGPK +RK+P++ A+  E L K  D     +E+K +  ++    A   + DG+  + +  +F KGQSKRIW
Sbjct:    4 AKKEQQRRIREGNTK---DGNLRVKGENFYRDGKRVKFLNMYKGGKSIRNAKGDLIRAAPLQSTDVPTARVQPDRRWFGNTRVISQDALQHFRDALGDKKNDSYQVLLRRNKLPMSLLEEKDTSESPTAKIIDTEPYGATFGPKAQRKKPRVAAASLEDLAKATDSDSQKYEEKKELDSTLGLMAATEQEDGWSQVAKEAIFHKGQSKRIW 211          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_CANGA (Nucleolar GTP-binding protein 2 OS=Candida glabrata GN=NOG2 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32
Identity = 77/211 (36.49%), Postives = 123/211 (58.29%), Query Frame = 2
Query:  170 KTKEKKVNVSGKPKHSLDAN-RTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQH-EFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLN--DHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTS-----AEGVEGDGFRDLVRHTMFEKGQSKRIW 772
            K K++++   G  K   D N R  G++  R +  V+ LNMYK+ +  +++ G V++  ++Q   +P+ R+QPDRRWFGNTR ++Q  L+ FR+ L      +Y V+LR  KLP SLL+  D  +  R  +L+TE F   FGPK +RK+P++ AS  E LV+  +     +E+K +   +      +  E +G+  + +  +F KGQSKRIW
Sbjct:    6 KEKQRRIR-EGTTK---DGNIRVKGENFYRDSKRVQFLNMYKSGKAIKNKHGDVIRAADYQDTTIPDARVQPDRRWFGNTRVISQDALQHFRDALGETQKDTYQVLLRRNKLPMSLLDEKDSTESPRARILETESFDQTFGPKAQRKKPRVAASSLEELVQATEEENKTYEEKEELKATLGLMGKQEDEENGWTQVTKEAIFSKGQSKRIW 212          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_PNECA (Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.365e-28
Identity = 71/175 (40.57%), Postives = 101/175 (57.71%), Query Frame = 2
Query:  254 RSASTVRRLNMYKT-RPKRDRKGKVL-QHEFQSKELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQARVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDLVRHTMFEKGQSKRIW 772
            R A  VR +N+ K+ + KR++ GK++ Q EFQSK++ + RIQP RRWF NTR ++Q  L  FRE     ++    V+L++ KLP SLL +  K  + +++D EPF D FG K  RKR KL AS  E+L   A  S + + +KN    + +      F       +F KG SKRIW
Sbjct:   20 RDAKKVRWINLLKSGKAKRNKSGKIIKQGEFQSKDVQDARIQPYRRWFSNTRVISQDVLNMFRESFAEKLNDPCKVLLKQNKLPMSLLMEPTKTRKANIIDIEPFDDTFGKKSXRKRAKLYASSIENLSNFAFESYENYIKKNSEYENVDKNIQKSF-----EAIFSKGTSKRIW 189          
BLAST of CX671748 vs. ExPASy Swiss-Prot
Match: NOG2_CRYNV (Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var. grubii GN=NOG2 PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.935e-27
Identity = 76/209 (36.36%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  197 SGKPKHSLDANRTDGKSGSRSASTVRRLNMYKT-RPKRDRKGKVLQHE-FQS--KELPNTRIQPDRRWFGNTRCVNQKQLEFFREELQSHMSSSYNVILREKKLPFSLLNDHQKQA--RVHLLDTEPFQDAFGPKGKRKRPKLLASDYESLVKRADGSQDAFEQKNDASTSAEGVEGDGFRDL----------VRHTMFEKGQSKRIWG 775
            SG         R  G++  R A +  R+ M    +  RDR GK+++   FQ   KE    R++PDRRWFGNTR ++Q  L+ FR  L+   +  Y+V+L+  KLP  LL D  K    R H+++TEPF + FGPK +RKRP+L     E L + +  S  A      A T+    +G+G  DL           R  ++ KG S+RIWG
Sbjct:   22 SGTSTGEFTLKRVKGENFYRDAKSASRVKMLNGGKAVRDRDGKIVEAAAFQKGEKEAEPGRVKPDRRWFGNTRVISQSALDHFRTALKEQKADPYSVLLKRNKLPMGLLQDDTKDGGRRPHIVETEPFGNTFGPKAQRKRPRLDIGSIEELGESSAASAAAAA----AETATAESQGNGTADLADIYHPTTSTAREPIYAKGTSRRIWG 226          
The following BLAST results are available for this feature:
BLAST of CX671748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
NOG2_HUMAN4.299e-3839.34Nucleolar GTP-binding protein 2 OS=Homo sapiens GN... [more]
NOG2_MOUSE7.334e-3839.81Nucleolar GTP-binding protein 2 OS=Mus musculus GN... [more]
NOG2_YARLI8.965e-3644.26Nucleolar GTP-binding protein 2 OS=Yarrowia lipoly... [more]
NOG2_SCHPO1.529e-3539.41Nucleolar GTP-binding protein 2 OS=Schizosaccharom... [more]
NOG2_YEAST1.869e-3341.58Nucleolar GTP-binding protein 2 OS=Saccharomyces c... [more]
NOG2_KLULA5.439e-3338.94Nucleolar GTP-binding protein 2 OS=Kluyveromyces l... [more]
NOG2_ASHGO9.277e-3337.91Nucleolar GTP-binding protein 2 OS=Ashbya gossypii... [more]
NOG2_CANGA7.854e-3236.49Nucleolar GTP-binding protein 2 OS=Candida glabrat... [more]
NOG2_PNECA2.365e-2840.57Nucleolar GTP-binding protein 2 OS=Pneumocystis ca... [more]
NOG2_CRYNV9.935e-2736.36Nucleolar GTP-binding protein 2 OS=Cryptococcus ne... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H09_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H09-P18-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671748 ID=CX671748; Name=CX671748; organism=Citrus sinensis; type=EST; length=777bp
GAAAAACCCTAGCCCCAAATTAGCAAAGCAAGCCGCCCACTTCTGCAAAC
TCAGAACTCAAGTTGGCGCCACCCTTACATCAAGAGCTGAAAGCCCCAAT
TTACTCAGCCTTCTGTCATCCTCCTTACAGGAATTCGCCGCCTTTACTCA
CCGGTGAACGAAAATGGCAAAGACGAAAGAGAAGAAAGTGAATGTGTCGG
GCAAGCCGAAACACTCGCTGGACGCGAATCGTACGGACGGGAAAAGCGGT
AGCCGAAGTGCGTCGACAGTACGCCGCCTCAATATGTACAAGACAAGGCC
GAAACGCGACCGTAAGGGCAAAGTTTTGCAGCACGAGTTTCAGTCGAAGG
AGTTGCCCAACACTCGCATTCAGCCAGACCGCCGCTGGTTCGGGAACACA
CGTTGTGTGAATCAGAAGCAGCTCGAATTCTTTCGTGAAGAGCTACAGAG
CCATATGTCTAGTAGCTATAATGTTATCTTGAGAGAGAAAAAACTGCCCT
TTTCTCTCCTAAATGATCACCAGAAGCAAGCTAGAGTTCACCTCCTTGAT
ACCGAGCCTTTTCAAGATGCCTTTGGACCTAAGGGAAAGAGGAAGAGGCC
AAAGCTATTGGCATCAGATTACGAATCTTTAGTTAAGAGAGCTGATGGTT
CTCAAGATGCCTTTGAGCAGAAGAATGATGCTAGTACATCAGCAGAAGGA
GTTGAGGGAGATGGATTTAGGGATCTTGTTCGGCATACAATGTTTGAGAA
GGGTCAAAGTAAACGTATATGGGGAGA
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