CX671747

Overview
NameCX671747
Unique NameCX671747
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_MOUSE (Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.089e-38
Identity = 75/127 (59.06%), Postives = 97/127 (76.38%), Query Frame = -2
Query:  502 YITLTKRIFLIDCPGVVYQNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQE--DDSSAEPN 876
            YITL +RIFLIDCPGVVY ++DSETDIVLKGVV+V  ++   +HIG VL+R K E++ + YKI+ W +  DFL +L   TGKLL+GGEPD +T +KM+L+DWQRG+IPFFV PP+ E   DS   P+
Sbjct:  350 YITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEYISKTYKIESWENAEDFLEKLALRTGKLLKGGEPDMLTVSKMVLNDWQRGRIPFFVKPPNAEIPTDSQLPPS 476          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_HUMAN (Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.533e-37
Identity = 72/117 (61.54%), Postives = 90/117 (76.92%), Query Frame = -2
Query:  526 YITLTKRIFLIDCPGVVYQNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQE 876
            YITL +RIFLIDCPGVVY ++DSETDIVLKGVV+V  ++   +HIG VL+R K E++ + YKI  W +  DFL +L   TGKLL+GGEPD  T  KM+L+DWQRG+IPFFV PP+ E
Sbjct:  350 YITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNAE 466          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_CRYNV (Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var. grubii GN=NOG2 PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 9.625e-32
Identity = 78/167 (46.71%), Postives = 105/167 (62.87%), Query Frame = -2
Query:  400 YITLTKRIFLIDCPGVV-YQNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKD----WVDEND---FLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQEDDSSAEPNVCGLNEEAVGDNNQASAALKVIASVMSSQQQRNV 876
            YITL +RI+LIDCPG+V    KDS+TD VLKGVVRV NL   AEHI  +L+RV+ E+L+R Y ++     W  E      L  + K +GKLL+GGEPD   AAKM+L+DW RGK+PFFV PP  + +S A+ +V     E V +  Q   A +     M  +Q+R++
Sbjct:  368 YITLMRRIYLIDCPGIVPVSAKDSDTDTVLKGVVRVENLATPAEHIPALLERVRPEYLERTYGLEHVEGGWHGEEGATFVLTAIAKKSGKLLKGGEPDQEAAAKMVLNDWIRGKVPFFVAPP-TKPESGADAHVSSATTEKVQEQEQKELAEEKETKEMLEEQERSL 533          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_KLULA (Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis GN=NOG2 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.239e-31
Identity = 64/125 (51.20%), Postives = 88/125 (70.40%), Query Frame = -2
Query:  505 YITLTKRIFLIDCPGVVY-QNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQEDDSSAEP 876
            YITL KRIFLIDCPG+V   +KDSE DI+ +GVVRV ++    ++I  +LKR K++HL+R Y+I  W D  DF+  + +  G+LL+GGEPD    +K IL+D+ RGKIP+FVPPP ++     EP
Sbjct:  354 YITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVSHPEQYIPGILKRCKRQHLERTYEISGWKDSVDFIEMIARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFVPPPEKDKIEEKEP 478          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_CANGA (Nucleolar GTP-binding protein 2 OS=Candida glabrata GN=NOG2 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30
Identity = 68/135 (50.37%), Postives = 92/135 (68.15%), Query Frame = -2
Query:  475 YITLTKRIFLIDCPGVVYQN-KDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQEDDSSAEPNVCGLNEEAV 876
            YITL KRIFLIDCPG+V  + KDSE DI+ +GVVRV ++    ++I  VLKR + +HL+R Y+I  W D  DF+  L +  G+LL+GGEPD    +K IL+D+ RGKIP+FV PP +E+D   +     L+EE V
Sbjct:  355 YITLMKRIFLIDCPGIVPPSTKDSEEDILFRGVVRVEHVSHPEQYIPGVLKRCQTKHLERTYEISGWKDATDFIEMLARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFVIPPEKEEDKKRK-----LDEEEV 484          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_YARLI (Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica GN=NOG2 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29
Identity = 62/119 (52.10%), Postives = 88/119 (73.95%), Query Frame = -2
Query:  523 YITLTKRIFLIDCPGVVYQN-KDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQED 876
            YITL KRIFLIDCPG+V  + KDSETDI+ +GVVRV ++    ++I  +L+R + +HL+R Y++  W +  +FL ++ +  G+LL+GGEPD    AK+IL+D+ RGKIP+FVPPP  ED
Sbjct:  347 YITLMKRIFLIDCPGIVPPSQKDSETDILFRGVVRVEHVSYPEQYIPALLERCETKHLERTYEVSGWSNATEFLEKIARKHGRLLKGGEPDESGIAKLILNDFNRGKIPWFVPPPQAED 465          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_CRYGA (Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.007e-29
Identity = 69/126 (54.76%), Postives = 87/126 (69.05%), Query Frame = -2
Query:  523 YITLTKRIFLIDCPGVV-YQNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKD----WVDEND---FLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQED 876
            YITL +RI+LIDCPG+V    KDS+TD VLKGVVRV NL   AEHI  +L+RV+ E+L+R Y ++     W  E      L  + K +GKLL+GGEPD   AAKM+L+DW RGKIPFFV PP + +
Sbjct:  378 YITLMRRIYLIDCPGIVPVSAKDSDTDTVLKGVVRVENLATPAEHIPALLERVRPEYLERTYNLEHVEGGWHGEQGATVILTAIAKKSGKLLKGGEPDQEAAAKMVLNDWIRGKIPFFVAPPAKSE 503          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_ASHGO (Nucleolar GTP-binding protein 2 OS=Ashbya gossypii GN=NOG2 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.961e-29
Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = -2
Query:  526 YITLTKRIFLIDCPGVVYQN-KDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQE 876
            YITL KRIFLIDCPG+V  + KD+E DI+ +GVVRV ++    ++I  VL+R K+ HL+R Y+I  W D  +F+  L +  G+LL+GGEPD    AK +L+D+ RGKIP+FV PP ++
Sbjct:  354 YITLMKRIFLIDCPGIVPPSAKDTEEDILFRGVVRVEHVSHPEQYIPAVLRRCKRHHLERTYEISGWADATEFIEMLARKQGRLLKGGEPDETGVAKQVLNDFNRGKIPWFVSPPDRD 471          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_NEUCR (Nucleolar GTP-binding protein 2 OS=Neurospora crassa GN=nog-2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.699e-28
Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = -2
Query:  523 YITLTKRIFLIDCPGVVYQNK-DSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQED 876
            Y+TL +RI+LIDCPG+V  N+ D+  D++L+GVVRV N+++  ++I  VL +VK  H++R Y++K W D   FL  L +  G+LL+GGEPD    AKM+L+D+ RGKIP+F P P +E+
Sbjct:  365 YVTLMRRIYLIDCPGIVPPNQNDTPQDLLLRGVVRVENVDNPEQYIPAVLNKVKPHHMERTYELKGWKDHIHFLEMLARKGGRLLKGGEPDVDGVAKMVLNDFMRGKIPWFTPAPEKEE 483          
BLAST of CX671747 vs. ExPASy Swiss-Prot
Match: NOG2_YEAST (Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae GN=NOG2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.943e-28
Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = -2
Query:  520 YITLTKRIFLIDCPGVVY-QNKDSETDIVLKGVVRVTNLEDAAEHIGEVLKRVKKEHLKRAYKIKDWVDENDFLLQLCKSTGKLLRGGEPDFMTAAKMILHDWQRGKIPFFVPPPHQEDD 876
            YITL KRIFLIDCPG+V   +KDSE DI+ +GVVRV ++    ++I  VLKR + +HL+R Y+I  W D  +F+  L +  G+LL+GGEPD    +K IL+D+ RGKIP+FV PP +E +
Sbjct:  355 YITLMKRIFLIDCPGIVPPSSKDSEEDILFRGVVRVEHVTHPEQYIPGVLKRCQVKHLERTYEISGWKDATEFIEILARKQGRLLKGGEPDESGVSKQILNDFNRGKIPWFVLPPEKEGE 474          
The following BLAST results are available for this feature:
BLAST of CX671747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
NOG2_MOUSE3.089e-3859.06Nucleolar GTP-binding protein 2 OS=Mus musculus GN... [more]
NOG2_HUMAN1.533e-3761.54Nucleolar GTP-binding protein 2 OS=Homo sapiens GN... [more]
NOG2_CRYNV9.625e-3246.71Nucleolar GTP-binding protein 2 OS=Cryptococcus ne... [more]
NOG2_KLULA6.239e-3151.20Nucleolar GTP-binding protein 2 OS=Kluyveromyces l... [more]
NOG2_CANGA5.282e-3050.37Nucleolar GTP-binding protein 2 OS=Candida glabrat... [more]
NOG2_YARLI1.537e-2952.10Nucleolar GTP-binding protein 2 OS=Yarrowia lipoly... [more]
NOG2_CRYGA2.007e-2954.76Nucleolar GTP-binding protein 2 OS=Cryptococcus ga... [more]
NOG2_ASHGO9.961e-2950.85Nucleolar GTP-binding protein 2 OS=Ashbya gossypii... [more]
NOG2_NEUCR1.699e-2848.74Nucleolar GTP-binding protein 2 OS=Neurospora cras... [more]
NOG2_YEAST4.943e-2851.67Nucleolar GTP-binding protein 2 OS=Saccharomyces c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H09-P18-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671747 ID=CX671747; Name=CX671747; organism=Citrus sinensis; type=EST; length=877bp
AAACAGTTTCATATTAATCCTATTAATATTCCATAGTGATGAAGATTGAA
ACCGAATTGCACGTAGCTTAAACAATGTGATCTACTAGGATGAGATTTAA
GGAAATTGACTACATTGACGAACTTACAATTCAACTTGTTGAAAACCAAA
AAATAAAACAATTGTCCAAACTACAAAATTTTGATTTGCTTATTAATATA
AAATAAAACAGCATGCAAAACTGTTTTCTTTCTCCTTTCATTATTTCTCT
GAGTCACTTGCCGGGGGCTCATCTTCGTCAGATTCCGATTCTGAATCAGA
GTCAGATTGCTGGTCAGATGCCTTGGCATCCGTGTCTGGATGTTGATCTA
TTGTCCCATCCTTCAACTCATTCTCGCCGAAGAGATCCCTTTGAACAGGG
ACATTTCTTTGCTGCTGGGACGACATAACGCTAGCAATTACTTTGAGGGC
TGCGGATGCCTGATTGTTATCGCCAACTGCCTCCTCGTTTAACCCACATA
CATTGGGTTCCGCTGAAGAATCGTCTTCTTGATGAGGAGGAGGGACGAAG
AAGGGAATCTTACCTCTCTGCCAGTCATGGAGGATCATCTTTGCCGCTGT
CATGAAGTCAGGTTCGCCACCCCTCAAAAGTTTGCCTGTTGATTTGCACA
ACTGAAGTAGAAAGTCATTTTCGTCAACCCAATCTTTTATCTTATATGCT
CTTTTAAGGTGCTCCTTCTTGACACGTTTTAGTACTTCTCCTATGTGTTC
AGCAGCATCCTCCAAGTTTGTGACACGAACCACTCCCTTCAGTACAATAT
CCGTTTCAGAGTCCTTGTTCTGGTAAACAACTCCAGGACAGTCAATCAAG
AAGATCCTTTTCGTGAGTGTTATATAC
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