CX671726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.350e-70 Identity = 131/207 (63.29%), Postives = 154/207 (74.40%), Query Frame = -1 Query: 234 SFFEKETSSSVTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 854 SFFE+E SV++RFNRLF RQKP+HH+LGGGKSADVLLWRNKKISASVLMGATAIWVLFEW+N+HFL++VC+AL+LGM+AQF W N SG NRS S+VPR VLP + FA +G V VN L LQD+AC G LKQ ++GS CN LTVLYIGFV AHT+PVLYE++ED+VD YKKLD+GFLS Sbjct: 30 SFFEQE--DSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLS 234
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.317e-41 Identity = 90/208 (43.27%), Postives = 126/208 (60.58%), Query Frame = -1 Query: 234 SFFEKETS-SSVTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 854 S +EK S S+V A+ R+FGR+KPVH +LGGGK ADV LWR+KK+S +VL ATAIWVLFE + YH L+++C +L + F W N L N+++ ++P +P E F + +++ +N+A +L+ IA G LK+ V+G+W N LT++YI FV HT+P+LYEKHEDKVD QY D LS Sbjct: 34 SEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLS 241
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.005e-41 Identity = 89/202 (44.06%), Postives = 119/202 (58.91%), Query Frame = -1 Query: 234 ETSSSVTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 839 E+ S++ A+ RLFGR+KPVH +LGGG ADV LWR+KK+SASVL ATAIWVLFE + YHFL++VC L+ + A F N N++ K+P + E F I + + +N+A +L+ IA G LK+ V+G+W N LT++YI FV HT+P+LYEKHEDKVD Y D LS Sbjct: 40 ESPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLS 241
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.848e-36 Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = -1 Query: 234 SSSVTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 833 SSS+ ++ RLFGR++PVH +LGGGK AD+ +W+NKK+S VL GATA WV+FE + YH LT++C +++ + F W N + N+S K+P +P E + + + +N L++IA G LK+ ++G N LT+ YI V T+P+ Y+K+EDKVD QY LD LS Sbjct: 63 SSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLS 262
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.406e-35 Identity = 77/204 (37.75%), Postives = 111/204 (54.41%), Query Frame = -1 Query: 234 EKETSSSVTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 845 + + S+S+ + RLFGR++P+H L GGGK AD+ LWRNKK+S VL AT W+LFE L Y+ LT+ +L + F W + S ++S +P +P +V + + + +N +L+DIA G LK+ +GS CN LT++YI V T+PVLYEK+EDKVD QY + D LS Sbjct: 34 DDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLS 237
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.104e-35 Identity = 79/200 (39.50%), Postives = 107/200 (53.50%), Query Frame = -1 Query: 237 TSSSVTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFL 836 +SSS ++ RLFGR+KPVH +LGGGK AD+ LWRNKK+S VL TA WVLFE YH L +C + + A F W N ++S +P +P + + + + +N L LL++IA G +K+ +IGS N LT+ Y V T+PVLYEK+EDKVD+ QY LD L Sbjct: 41 SSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVL 240
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.474e-34 Identity = 73/208 (35.10%), Postives = 116/208 (55.77%), Query Frame = -1 Query: 234 EKETSSS----VTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 845 EK++SSS + ++ RLFGR++PVH +LGGGK AD+ +W++KK+S V GAT WVLFE + YH LT++C +++ + F W N + ++S K+P +P E + + + +N + L++IA G +K+ ++G + LT+ YI V T+P+ Y+K+EDKVDS QY LD+ S Sbjct: 51 EKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFS 258
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.753e-31 Identity = 68/191 (35.60%), Postives = 103/191 (53.93%), Query Frame = -1 Query: 234 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 806 +LF RQ+ +H + GGGK AD+LLWR KI+A++++G + +W L E + Y+F+T++C A + ML F W S N +P VL F + + N+ L L D+ACG +IG++ N + +L+IGFV+ TLPV+YE +ED VD+ YKK+D+ LS Sbjct: 22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLS 212
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 7.496e-29 Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = -1 Query: 234 VTARFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 824 + A R+FGR++P+H +LGGGK ADVLLWR+KK++ +L T IW+LF + LT +C +L +L F W S N+S + +P + + + +N A L+ IA +K VIG+W + L++LYI FV HT+P+LYEK+ED++D Y+ ++ FLS Sbjct: 47 INAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLW---SNALNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLS 240
BLAST of CX671726 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.911e-24 Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = -1 Query: 234 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSASKVPRFVLPPEVFANIGTTVCANVNEALGLLQDIACGGKLKQXXXXXXXXXXXXVIGSWCNLLTVLYIGFVAAHTLPVLYEKHEDKVDSXXXXXXXXXXXQYKKLDSGFLS 806 RL GRQ VH +GGGK+AD+LLWR + +S V++ +T W++FE+ FL++ L++ ++ F +S NR +P VL E+ + + +N L + D+ G + IGS+ +L T+LYIG + + T+P LY K++ KVD YK +D +S Sbjct: 24 RLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVIS 214 The following BLAST results are available for this feature:
BLAST of CX671726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671726 ID=CX671726; Name=CX671726; organism=Citrus sinensis; type=EST; length=869bpback to top |