CX671724

Overview
NameCX671724
Unique NameCX671724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2C_XENLA (Kinesin-like protein KIF2C OS=Xenopus laevis GN=kif2c PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLNK+ELS+KE DI++V S N + VHEPKLKVDLT Y+E   F FD   DE  TN+ VYR
Sbjct:  262 RICVCVRKRPLNKQELSKKEIDIISVPSKNIVLVHEPKLKVDLTKYLENQAFRFDFSFDETATNEVVYR 330          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2C_RAT (Kinesin-like protein KIF2C OS=Rattus norvegicus GN=Kif2c PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLNK+EL++KE D+++V    L  VHEPKLKVDLT Y+E   FCFD   DE  +N+ VYR
Sbjct:  204 RICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYR 272          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2C_MOUSE (Kinesin-like protein KIF2C OS=Mus musculus GN=Kif2c PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLNK+EL++KE D+++V    L  VHEPKLKVDLT Y+E   FCFD   DE  +N+ VYR
Sbjct:  254 RICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYR 322          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2C_CRIGR (Kinesin-like protein KIF2C OS=Cricetulus griseus GN=KIF2C PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLNK+EL++KE D+++V    L  VHEPKLKVDLT Y+E   FCFD   DE  +N+ VYR
Sbjct:  252 RICVCVRKRPLNKQELAKKEIDVISVPSKCLLFVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYR 320          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2C_MACFA (Kinesin-like protein KIF2C OS=Macaca fascicularis GN=KIF2C PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLNK+EL++KE D++++    L  VHEPKLKVDLT Y+E   FCFD   DE  +N+ VYR
Sbjct:  204 RICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYR 272          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2C_HUMAN (Kinesin-like protein KIF2C OS=Homo sapiens GN=KIF2C PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTVSDNALT-VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLNK+EL++KE D++++    L  VHEPKLKVDLT Y+E   FCFD   DE  +N+ VYR
Sbjct:  258 RICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYR 326          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF6_DICDI (Kinesin-related protein 6 OS=Dictyostelium discoideum GN=kif6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 37/68 (54.41%), Postives = 50/68 (73.53%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTVSDNA-LTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVY 898
            +IRV VRKRPLNKKE+++ E+DI+ V     L V+EPK K+DL+ ++EKH+F FD V DE   N +VY
Sbjct:  453 RIRVCVRKRPLNKKEIAKSEKDIIEVLPKKDLIVNEPKTKLDLSKFIEKHKFTFDGVFDESANNYQVY 520          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2B_MACFA (Kinesin-like protein KIF2B OS=Macaca fascicularis GN=KIF2B PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.615e-13
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLN++E + K+ DI+TV SDN + VHE K KVDLT Y+E   FCFD   D++ +N+ VY+
Sbjct:  210 RICVCVRKRPLNQRETTLKDLDIITVPSDNVVMVHESKQKVDLTRYLENQTFCFDHAFDDKASNELVYQ 278          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2B_BOVIN (Kinesin-like protein KIF2B OS=Bos taurus GN=KIF2B PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.615e-13
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLN++E +R++ DIVT+ SDN + VHE K KVDLT Y+E   FCFD   D+  +N+ VY+
Sbjct:  213 RICVCVRKRPLNRQEATREDLDIVTIPSDNVVMVHESKQKVDLTRYLENQTFCFDHAFDDTASNELVYQ 281          
BLAST of CX671724 vs. ExPASy Swiss-Prot
Match: KIF2B_HUMAN (Kinesin-like protein KIF2B OS=Homo sapiens GN=KIF2B PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  698 KIRVVVRKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYR 901
            +I V VRKRPLN++E + K+ DI+TV SDN + VHE K KVDLT Y++   FCFD   D++ +N+ VY+
Sbjct:  213 RICVCVRKRPLNQRETTLKDLDIITVPSDNVVMVHESKQKVDLTRYLQNQTFCFDHAFDDKASNELVYQ 281          
The following BLAST results are available for this feature:
BLAST of CX671724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KIF2C_XENLA6.588e-1562.32Kinesin-like protein KIF2C OS=Xenopus laevis GN=ki... [more]
KIF2C_RAT6.588e-1557.97Kinesin-like protein KIF2C OS=Rattus norvegicus GN... [more]
KIF2C_MOUSE6.588e-1557.97Kinesin-like protein KIF2C OS=Mus musculus GN=Kif2... [more]
KIF2C_CRIGR6.588e-1557.97Kinesin-like protein KIF2C OS=Cricetulus griseus G... [more]
KIF2C_MACFA8.605e-1556.52Kinesin-like protein KIF2C OS=Macaca fascicularis ... [more]
KIF2C_HUMAN8.605e-1556.52Kinesin-like protein KIF2C OS=Homo sapiens GN=KIF2... [more]
KIF6_DICDI1.623e-1354.41Kinesin-related protein 6 OS=Dictyostelium discoid... [more]
KIF2B_MACFA3.615e-1353.62Kinesin-like protein KIF2B OS=Macaca fascicularis ... [more]
KIF2B_BOVIN3.615e-1353.62Kinesin-like protein KIF2B OS=Bos taurus GN=KIF2B ... [more]
KIF2B_HUMAN8.054e-1352.17Kinesin-like protein KIF2B OS=Homo sapiens GN=KIF2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12G08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12G08-N16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671724 ID=CX671724; Name=CX671724; organism=Citrus sinensis; type=EST; length=906bp
TCGCTTTTAATCTGCCTTTCAGATCTGATTGTAACTTTCATTTACTCTCA
TTTCAATCTCAGATCCGAATTAACAATTCAATTCGGCAATCCTTTCATGT
TCTTCTCTGAATTTGGGTTTTCTCCACCTTATCTTAAAAGTTGGCTCCGC
AAAGACGGTCGCAGCGCCACATGGGTGGCCAGATGCAGCAGAGCAATGCT
GCTGCGGCGGCGGCTGCGCTGTATGATCACCCCGGTGGGTCCATGCATAA
CAATGCGGGTCCCACAACTGACGCCGGTGATGCTGTCATGGCGCGGTGGC
TCCAGTCTGCTGGACTGCAGCATCTGGCCTCTCCCTTGGCTTCTAACGGC
ATTGATCATCGCCTCCTCCCCAATCTTCTCATGCAGGGTTATGGGGCACA
ATCTGCAGAAGAGAAGCAGAGGCTTTTCAAATTAATGAGAAACCTCAACT
TCAATGGTGAATCTGGGGCTGAGCCACACACACCAACTGCCCAAACATCA
GGGGTGGTTGCATCAGATGGGCTTTATTCTCCAGAGTTTAGAGGGGATTT
TGGAGCTGGCCTTTTGGATCTTCATGCTATGGATGATACTGAGCTTTTAT
CTGAGGCTGGCAGCAAAAAGAGCAAACTGATGCAGATGCCTCAGCTCCAG
TTCCCACAAATGAAAAAGAGAGCAATGCCAGAGAAAATAATGTGGCTAAA
ATTAGAGTTGTGGTACGTAAAAGACCCTTAAACAAGAAGGAGCTCTCTAG
GAAGGAGGAGGATATTGTAACTGTGAGTGACAATGCTTTGACTGTCCATG
AACCCAAGCTAAAGGTGGACTTGACTGCATATGTGGAGAAGCATGAGTTC
TGCTTTGATGCTGTTTTGGATGAACGTGTCACCAATGATGAGGTATATCG
TGTCAC
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