CX671722
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671722 vs. ExPASy Swiss-Prot
Match: R3HD2_MOUSE (R3H domain-containing protein 2 OS=Mus musculus GN=R3hdm2 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 3 Query: 186 FLVEALQ-NPRHRLTILRMELDIQRFLQNPDQQHFEFQHFP--TSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPN 653 FLV L+ NPR R+ +L++E +I F+ + + Q F+ FP TSY R+ HRV+ ++G+ ++ ++ G +++ KT+ ++ P R SE ++ E + I +R +A N+ R S+EER+EEY R R RIF+ + N Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM-----DHNVDQTGKAVIINKTSSTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASMDRDDNQMRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQN 306
BLAST of CX671722 vs. ExPASy Swiss-Prot
Match: R3HD2_BOVIN (R3H domain-containing protein 2 OS=Bos taurus GN=R3HDM2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 3 Query: 186 FLVEALQ-NPRHRLTILRMELDIQRFLQNPDQQHFEFQHFP--TSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPN 653 FLV L+ NPR R+ +L++E +I F+ + + Q F+ FP TSY R+ HRV+ ++G+ ++ ++ G +++ KT+ ++ P R SE ++ E + I +R +A N+ R S+EER+EEY R R RIF+ + N Sbjct: 157 FLVNTLKKNPRDRMMLLKLEQEILDFINDNNNQ---FKKFPQMTSYHRMLLHRVAAYFGM-----DHNVDQTGKAVIINKTSNTRIPEQRFSE----HIKDEKNTEFQQRFILKRDDASMDRDDNQIRVPLQDGRRSKSIEEREEEYQRVRERIFARETGQN 306
BLAST of CX671722 vs. ExPASy Swiss-Prot
Match: R3HD1_HUMAN (R3H domain-containing protein 1 OS=Homo sapiens GN=R3HDM1 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 5.752e-12 Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 186 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSEIPAKQSEESDKLEKI-KIAIRRRPNAGCVNGANETGTKRSPVR---SVEERKEEYDRARARIFSGPSSPNSED 662 FLV L+N PR R+ +L++E +I F+ N + +F TSY R+ HRV+ ++GL ++ ++ G ++V KT+ ++ P + +E + DK E K I +R N+ N+ + R S+EER+EEY RAR RIFS S + E+ Sbjct: 156 FLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPM-TSYHRMLLHRVAAYFGL-----DHNVDQSGKSVIVNKTSNTRIPDQKFNE-----HIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQEN 308
BLAST of CX671722 vs. ExPASy Swiss-Prot
Match: ARP21_MOUSE (cAMP-regulated phosphoprotein 21 OS=Mus musculus GN=Arpp21 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 49/163 (30.06%), Postives = 92/163 (56.44%), Query Frame = 3 Query: 186 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSE-IPAKQSEESDK---LEKIKIAIRRRPNAGCVNGANETGTKRSPVRSVEERKEEYDRARARIFSGPSSPNSE 659 FL+ L+N R R+ +L+ME ++ F+ + + + +F +SY R+ HRV+ ++GL ++ ++ G +++ KT+ ++ P R E + ++SEES K L++ +I + N ++ + +RS +S+EER+EEY R R RIF+ S + E Sbjct: 151 FLINTLKNNSRDRMILLKMEQEMIDFIADSNNHYKKFPQM-SSYQRMLVHRVAAYFGL-----DHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKSEESQKRFILKRDNSSIDKEDNQNRMHPFRDD--RRS--KSIEEREEEYQRVRERIFAHDSVCSQE 303
BLAST of CX671722 vs. ExPASy Swiss-Prot
Match: ARP21_HUMAN (cAMP-regulated phosphoprotein 21 OS=Homo sapiens GN=ARPP21 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11 Identity = 51/173 (29.48%), Postives = 89/173 (51.45%), Query Frame = 3 Query: 186 FLVEALQN-PRHRLTILRMELDIQRFLQNPDQQHFEFQHFPTSYLRLAAHRVSQHYGLVTMVQENGIEGLGNRILVRKTAESKYPAVRLSE-IPAKQSEESDKLEKIKIAIRRRPNAGCVNGANETGTKRSPVR------SVEERKEEYDRARARIFSGPSSPNSEDTLTQVS 680 FL+ L+N R R+ +L+ME +I F+ + + + +F +SY R+ HRV+ ++GL ++ ++ G +++ KT+ ++ P R E + ++ EES K I +R N+ N+ + P R S+EER+EEY R R RIF+ S + E + S Sbjct: 152 FLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQM-SSYQRMLVHRVAAYFGL-----DHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQKR-----FILKRDNSSIDKEDNQQN-RMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQESLFVENS 312 The following BLAST results are available for this feature:
BLAST of CX671722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671722 ID=CX671722; Name=CX671722; organism=Citrus sinensis; type=EST; length=697bpback to top |