CX671720

Overview
NameCX671720
Unique NameCX671720
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13137 contig Csv1_Contig13137:69..810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.917e-56
Identity = 120/164 (73.17%), Postives = 122/164 (74.39%), Query Frame = 1
Query:   85 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            ST+F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 STVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.917e-56
Identity = 120/164 (73.17%), Postives = 122/164 (74.39%), Query Frame = 1
Query:   85 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            ST+F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 STVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.504e-56
Identity = 123/166 (74.10%), Postives = 123/166 (74.10%), Query Frame = 1
Query:   79 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            MSST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    1 MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.577e-56
Identity = 120/166 (72.29%), Postives = 123/166 (74.10%), Query Frame = 1
Query:   79 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            M+S+ FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    1 MASSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.284e-56
Identity = 122/166 (73.49%), Postives = 123/166 (74.10%), Query Frame = 1
Query:   79 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            MSST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    1 MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.514e-56
Identity = 119/164 (72.56%), Postives = 121/164 (73.78%), Query Frame = 1
Query:   85 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.514e-56
Identity = 119/164 (72.56%), Postives = 121/164 (73.78%), Query Frame = 1
Query:   85 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.243e-55
Identity = 119/161 (73.91%), Postives = 119/161 (73.91%), Query Frame = 1
Query:   94 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    4 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.623e-55
Identity = 121/166 (72.89%), Postives = 123/166 (74.10%), Query Frame = 1
Query:   79 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            M+ST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    1 MAST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of CX671720 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.768e-55
Identity = 118/164 (71.95%), Postives = 121/164 (73.78%), Query Frame = 1
Query:   85 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 576
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK Y+LFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
The following BLAST results are available for this feature:
BLAST of CX671720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_MESCR1.917e-5673.17V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU1.917e-5673.17V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_KALDA2.504e-5674.10V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH5.577e-5672.29V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL_GOSHI7.284e-5673.49V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSJ9.514e-5672.56V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI9.514e-5672.56V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PHAAU1.243e-5573.91V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH1.623e-5572.89V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL_AVESA2.768e-5571.95V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12G04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12G04-N8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671720 ID=CX671720; Name=CX671720; organism=Citrus sinensis; type=EST; length=742bp
CTTGAGAGAAAGAGCACAGAACGAATAACGAAAACAAAACACACGCTCAA
GTCTCAGATCCAGTCCGCATCTCCCAAGATGTCTTCAACATTATTCAGTG
GCGATGAAACCGCTCCTTTCTTCGGCTTTCTCGGCGCCGCTGCCGCCCTA
GTCTTTTCCTGTATGGGAGCTGCGTACGGAACGGCGAAGAGTGGCGTCGG
TGTGGCGTCGATGGGAGTGATGAGGCCGGAGCTTGTGATGAAATCGATCG
TGCCCGTTGTTATGGCGGGAGTTTTGGGTATTTACGGTTTGATTATTGCT
GTTATTATTAGTACCGGAATTAACCCTAAGGCCAAATCTTATTACCTTTT
CGATGGCTACGCGCATCTCTCTTCTGGCCTCGCTTGTGGCCTTGCTGGTC
TCTCCGCTGGTATGGCAATTGGGATCGTCGGTGATGCTGGTGTCAGAGCC
AATGCTCAACAGCCGAAGCTTTTCGTTGGGATGATCCTCATTCTGATCTT
TGCTGAAGCGCTGGCACTTTATGGACTTATTGTTGGTATCATTCTTTCTT
CTCGTGCTGGTCAGTCAAGAGCAGACTAGAAGAGGATGCTTTGCTTGGTG
GTTATTTGGCCTGTTGTGTTCCATTAAGAAGAATTCAGTTCATATTGCCT
GTGACGGGAGGTGGTAGTCTGCGTTGGGTAGTGTTTTTCTTTTTCGACTT
AAAAGTTATTGTCTGTGGTGTGATTGTTCAACCAGATTGATT
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