EG358279

Overview
NameEG358279
Unique NameEG358279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6859 contig Csv1_Contig6859:1..641. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.777e-20
Identity = 44/104 (42.31%), Postives = 64/104 (61.54%), Query Frame = -3
Query:   58 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSA 369
            T + VGD  GW++  +    YS WA+++TF VGD+LVFN+ AG H V  V +S + +C + + +S  +    ++ L  +G HYFIC  PGH  GG KL+I V A
Sbjct:   25 TVYTVGDTSGWVIGGD----YSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKA 124          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.442e-20
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 578
            V VNG NA PLYKFLK+SK G+FG  IKWNF+KFLVD EGNV+ RYSPTT+P ++E DIK  LG
Sbjct:  104 VDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLLG 167          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.442e-20
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 578
            V VNG NA PLYKFLK+SK G+FG  IKWNF+KFLVD EGNV+ RYSPTT+P ++E DIK  LG
Sbjct:  104 VDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLLG 167          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX4_GOSHI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.442e-20
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 578
            V VNG NA PLYKFLK+SK G+FG  IKWNF+KFLVD EGNV+ RYSPTT+P ++E DIK  LG
Sbjct:  105 VDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLLG 168          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX4_HELAN (Probable phospholipid hydroperoxide glutathione peroxidase OS=Helianthus annuus GN=GPXHA-2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19
Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 3
Query:  381 SSVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 575
            S V VNG  A+PLYKFLK+SK G+ G  IKWNFTKFLVD EG V+ RY+PTTSP++IE DIK  L
Sbjct:  113 SKVNVNGKEADPLYKFLKSSKGGFLGDSIKWNFTKFLVDREGKVVDRYAPTTSPLSIEKDIKKLL 177          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: UMEC_ARMRU (Umecyanin OS=Armoracia rusticana PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.197e-19
Identity = 45/98 (45.92%), Postives = 59/98 (60.20%), Query Frame = -3
Query:   64 VGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 357
            VG  + W   P+ P  Y  WA  +TF VGD L F+FAAG HDV  VT+ +F+ C   +P+S  T  P  + L  +GP Y+IC+   HC  GQKL+INV
Sbjct:    5 VGGDMEW-KRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.197e-19
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 578
            V VNG NA P+YKFLK+SK G FG  +KWNFTKFLVD +GNV+ RY+PTTSP +IE D+K  LG
Sbjct:  105 VDVNGSNAAPIYKFLKSSKGGLFGDGLKWNFTKFLVDKDGNVVDRYAPTTSPKSIEKDVKKLLG 168          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.197e-19
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = -3
Query:   58 VGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSA 357
            VGD   W  P + P  Y+ WA  +TF VGD L F+FAAG HDV  V++++F  C    P+S  T  P  + L  +GP YFIC+   HC  GQKL+I V A
Sbjct:   27 VGDDTEWTRPMD-PEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVA 125          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: GPX4_SOLLC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Solanum lycopersicum GN=GPXle-1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.175e-19
Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 3
Query:  387 VRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 578
            V VNG NA PLY+FLK+SK G+FG  IKWNF+KFL+D EG+V+ RYSPTTSP ++E DIK  LG
Sbjct:  104 VDVNGDNAAPLYRFLKSSKGGFFGDGIKWNFSKFLIDKEGHVVDRYSPTTSPASMEKDIKKLLG 167          
BLAST of EG358279 vs. ExPASy Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 4.175e-19
Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = -3
Query:   58 TRHVVGDALGWIVPPNGPATYSNWAANQTFTVGDTLVFNFAAGNHDVTRV-TQSSFNAC---NTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSA 369
            T H+VGD  GW VP + P  YS WAA +TF VGD+L FNF A  H+V  + T+ SF+AC   N+ + + RT  SP    L   G HYF+C+   HC  GQKL+INV A
Sbjct:    3 TVHIVGDNTGWSVP-SSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERT--SPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVA 107          
The following BLAST results are available for this feature:
BLAST of EG358279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
BCP_PEA3.777e-2042.31Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
GPX4_TOBAC6.442e-2070.31Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_NICSY6.442e-2070.31Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_GOSHI6.442e-2070.31Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_HELAN2.448e-1967.69Probable phospholipid hydroperoxide glutathione pe... [more]
UMEC_ARMRU3.197e-1945.92Umecyanin OS=Armoracia rusticana PE=1 SV=1[more]
GPX4_SPIOL3.197e-1967.19Probable phospholipid hydroperoxide glutathione pe... [more]
BCB1_ARATH3.197e-1946.00Blue copper protein OS=Arabidopsis thaliana GN=BCB... [more]
GPX4_SOLLC4.175e-1967.19Probable phospholipid hydroperoxide glutathione pe... [more]
CPC_CUCSA4.175e-1949.07Cucumber peeling cupredoxin OS=Cucumis sativus PE=... [more]

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Properties
Property NameValue
Genbank description10b3 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010b3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358279 ID=EG358279; Name=EG358279; organism=Citrus sinensis; type=EST; length=641bp
ACTACCGCTGGGCTGAGGGGCCGGAGAAGAAGGTTGGGGAGCAGGAGAAG
ATCCCCTGGCGCTAACGTTGATGGCTAATTTCTGACCGCCGAGGCAGTGG
CCTGGAAATGAGCAAATGAAGTAGTGTGGCCCAGAAGCTGTAAGAGTAAC
ACTCGCAGGGCTATTTGTGGTTCTGGATAGGGGACTAGTGGTGTTGCATG
CATTGAATGATGATTGTGTTACTCGAGTAACATCATGGTTTCCAGCGGCA
AAGTTAAACACAAGAGTGTCACCGACGGTGAAGGTCTGGTTTGCAGCCCA
GTTAGAGTAAGTAGCAGGACCATTAGGAGGAACAATCCAGCCTAGTGCAT
CACCCACCACATGCCTTGTCTGTGCCGTCGAGCTCTGTACGCGTCAATGG
TCCAAATGCGGAACCTCTATATAAATTTCTCAAAGCAAGTAAAACTGGAT
ACTTTGGGTCCAGAATAAAGTGGAACTTCACCAAGTTTTTAGTTGATACA
GAAGGAAATGTCATCGGGCGTTATAGCCCAACCACTTCTCCGATGGCAAT
TGAGGGTGACATAAAGAATGCACTGGGAGATGTTTAGGAGATTTCTGGGT
GACTAGTCATTCCTGTGCAAGACATGATATAATAGTGTATG
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