CX671677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671677 vs. ExPASy Swiss-Prot
Match: NCBP1_ARATH (Nuclear cap-binding protein subunit 1 OS=Arabidopsis thaliana GN=ABH1 PE=1 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 2.416e-62 Identity = 127/246 (51.63%), Postives = 166/246 (67.48%), Query Frame = -1 Query: 157 ENIDQFHASDRPWEVLRNAVSKTYNRICDLRKEIISLKKGVTXXXXXXXXXXXXXXXXXXXXXLVDGEPVLGGNPARLSRLKLHAEKAKNEEISAKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGTLQDLKSTHADAMAVDLEEPSAMELDNEDGRPKKSQXXXXXXXNVYNIGEKEQWCLSTLGYVKAFSRQYASEIWPHMEKLDAEVLS-EDTHPLFRRAVYSGLRRPIN 891 EN+DQFH SD+PWE+L NA++KTYNRI DLRK+I ++ K V LV+GEPVLG NPA++ RLK EK E+S +ESLEAKEAL RA+ E E L L L+++F VL ERLPD ++ ++QDLKS A+ ++PSAM++D+E+G PKKS +GE+EQWCLSTLGY+ AF+RQYASEIWPHMEKL++EV S ED HPLF +A+ S L+ P++ Sbjct: 618 ENVDQFHVSDQPWEILGNALNKTYNRISDLRKDISNITKNVLVAEKASANARVELEAAESKLSLVEGEPVLGENPAKMKRLKSTVEKTGEAELSLRESLEAKEALLNRALSETEVLLLLLFQSFLGVLKERLPDPTKVRSVQDLKSIGAED-----DKPSAMDVDSENGNPKKS----------CEVGEREQWCLSTLGYLTAFTRQYASEIWPHMEKLESEVFSGEDVHPLFLQAISSALQFPLH 848
BLAST of CX671677 vs. ExPASy Swiss-Prot
Match: NCBP1_ORYSJ (Nuclear cap-binding protein subunit 1 OS=Oryza sativa subsp. japonica GN=ABH1 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.241e-58 Identity = 120/244 (49.18%), Postives = 158/244 (64.75%), Query Frame = -1 Query: 163 NIDQFHASDRPWEVLRNAVSKTYNRICDLRKEIISLKKGVTXXXXXXXXXXXXXXXXXXXXXLVDGEPVLGGNPARLSRLKLHAEKAKNEEISAKESLEAKEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGTLQDLKS--THADAMAVDLEEPSAMELDNEDGRPKKSQXXXXXXXNVYNIGEKEQWCLSTLGYVKAFSRQYASEIWPHMEKLDAEVLSEDTHPLFRRAVYSGLRRP 888 N+DQFH SDRPWE+LRNAVSKTYNRI DLRKEI +L+KG+ +VDG+PV NP RL RL+ A+KAK E++ +ESLEAKEAL AR +EE++ L L+++F VL ERLP S G + +L++ + ++ A D E + ME+DNE+G SQ +N+GE EQWCL TLGY+K+FSRQYA+EIW H+ LD E+ + HPL R+A +SGL RP Sbjct: 618 NVDQFHVSDRPWEILRNAVSKTYNRIFDLRKEIQTLRKGLQAAKEASEKAARELEEAKSIIEIVDGQPVPSENPGRLRRLQARADKAKEGEVTTEESLEAKEALLARGLEESKELLRLLFKSFVEVLTERLPPISADGDVPNLRAGDPNVNSSARD-PEATTMEIDNENGGDNDSQLNGQNKKISHNVGELEQWCLCTLGYLKSFSRQYATEIWSHIAMLDQEIFVGNIHPLIRKAAFSGLCRP 860 The following BLAST results are available for this feature:
BLAST of CX671677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671677 ID=CX671677; Name=CX671677; organism=Citrus sinensis; type=EST; length=891bpback to top |