CX671676
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671676 vs. ExPASy Swiss-Prot
Match: TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.928e-67 Identity = 124/166 (74.70%), Postives = 149/166 (89.76%), Query Frame = 2 Query: 152 MGSLLLREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCP 649 MGSL+ REW GFQQFP+ATQ KLIE KLKQ+++N++T+LV+GKGGVGKSSTVNS+IGE+VV V+ FQ+E LRPVMVSR+ GGFT+NIIDTPGLVEAGYVN+QALELIKGFL+N+TIDVLLY DRLD YRVD+LD+Q++ A+T TFGK+IW K+LLVLTHAQ P Sbjct: 1 MGSLV-REWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSP 165
BLAST of CX671676 vs. ExPASy Swiss-Prot
Match: TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2) HSP 1 Score: 241.506 bits (615), Expect = 3.350e-63 Identity = 115/161 (71.43%), Postives = 137/161 (85.09%), Query Frame = 2 Query: 167 LREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCP 649 LREW G QQFP ATQ+KL+E+L K K+E+V++LT+LVMGKGGVGKSSTVNSVIGE+ V++FQSE LRP +VSR++ GFTLNIIDTPGL+E GYVN QA+ +IK FLLN TIDVLLY DRLD YRVDDLDRQ++ A+T FGK+IW+KS LVLTHAQ P Sbjct: 7 LREWIGIQQFPPATQSKLLEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSP 167
BLAST of CX671676 vs. ExPASy Swiss-Prot
Match: TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.984e-61 Identity = 113/161 (70.19%), Postives = 135/161 (83.85%), Query Frame = 2 Query: 167 LREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCP 649 +REW+G F ATQ KL+ELL LKQE+VN+LTILVMGKGGVGKSSTVNS+IGERVV+++ FQSE RPVMVSRS+ GFTLNIIDTPGL+E GY+N AL +IK FLL+KTIDVLLY DRLDAYRVD+LD+ + KA+T +FGK IW K+++ LTHAQ P Sbjct: 8 VREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSP 168
BLAST of CX671676 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19 Identity = 53/167 (31.74%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 158 SLLLREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGY---VNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCP 649 +LL AG A + K +E ++ +E + +L ILV+GK GVGKS+T+NS++G ++ ++++F +S + G + IDTPGL A N + L +K + D++LY DRLD D + +++ +T + G IW+ +++ LTHA P Sbjct: 821 ALLAGRQAGQLFSLDAAKKKAVESEAEGNEELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAP 987
BLAST of CX671676 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17 Identity = 62/221 (28.05%), Postives = 108/221 (48.87%), Query Frame = 2 Query: 26 AENTNTVKSDHPGEVR------R*RLYSLSLDATRRRNNIYANSPKKSMG---SLLLREWAGFQQFPSATQNKLIELLSKLKQENVN-TLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAG---YVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCP 649 AE++ T ++D E R R + LS + +N+ +G L R + F + + E L Q+ ++ + TI+V+GK GVGKS+T+NS+ E ++ ++FQ + + G + +IDTPGL+ + + N + L+ ++ F+ D++LY DRLD D D +++ +T FG IW +++ LTHA P Sbjct: 368 AEDSTTAETDEHDETREKLQFIRVKFLRLSHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAMAEQLEAAAQDPLDFSCTIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAP 588
BLAST of CX671676 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.084e-17 Identity = 65/228 (28.51%), Postives = 108/228 (47.37%), Query Frame = 2 Query: 5 SRSKFCWAENTNTVKSDHPGEVR------R*RLYSLSLDATRRRNNIYANSPKKSMG---SLLLREWAGFQQFPSATQNKLIELLSKLKQENVN-TLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEA---GYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCP 649 S ++F AE++ T ++D E R R + L+ + +N+ +G L R + F + + E L Q+ ++ + TI+V+GK GVGKS+T+NS+ E ++FQ R V G + +IDTPGL+ + N + L +K F+ D++LY DRLD D D +++ ++ FG IW +++ LTHA P Sbjct: 479 SHNQFQQAEDSTTTEADEHDETREKLQLIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAMAEQLEAAGQDPLDFSCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVP 706
BLAST of CX671676 vs. ExPASy Swiss-Prot
Match: GTPA_DICDI (GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.240e-16 Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = 2 Query: 206 TQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAG--YVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHA 637 T +L E+L+ LK N +L++G+ GVGKSST+N+V G + V+S +S P SR GF LNIIDTPG +++ V+ + I+ +L KTI +L+ ++ R D + +I T G Q+WR + +VLT+A Sbjct: 134 TTEELQEMLAVLKGVQ-NECNVLLLGRTGVGKSSTLNTVFGIDI-PVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLDSQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRNAAVVLTYA 277
BLAST of CX671676 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14 Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 260 TLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGL----VEAGYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHA 637 +L ILV+GK GVGKS+T+NS+ G+ ++F+ R V + G + IDTPG + N + L IK ++ + DV+LY DRLD + D +++ +T FG IW ++LV+TH+ Sbjct: 166 SLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTHS 295 The following BLAST results are available for this feature:
BLAST of CX671676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671676 ID=CX671676; Name=CX671676; organism=Citrus sinensis; type=EST; length=710bpback to top |