CX671671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.257e-33 Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = -2 Query: 433 MKGGKSKSDTRNA--KLSVNXXXXXXXXXXXXXXK----DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 771 MKGGKSK++++ A KL+VN DPNKPKRP SAFFVFMEEFR+ + K+HP+NK+V+AVGKA G KWK+MS+A+KAPYVAK+EKRKVEYEK+M+ YN++QAEG Sbjct: 1 MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.699e-30 Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = -2 Query: 433 MKGGKSKSDTRNAKLSVNXXXXXXXXXXXXXXKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 771 MKGGKSK+ + N KL+V DPNKPKRP SAFFVFME+FR+ YK+ HP NKSVA VGKAGG+KWK ++ A+KAP+++KAEKRK EYEK+++ YN++QA G Sbjct: 1 MKGGKSKAKSDN-KLAVKKQAADTKKTKKAVK-DPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG 111
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.321e-29 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = -2 Query: 445 MKGGKSKSDTRNA--KLSVNXXXXXXXXXXXXXXK-----DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 771 MKGGKSK +++ A KL+VN K DPNKPKRP SAFFVFM +FREQYKKDHP NKSVAAVGKA GE+WKS+SE +KAPYV +A K+K EYE ++ YN++ Sbjct: 1 MKGGKSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK 116
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.114e-27 Identity = 64/118 (54.24%), Postives = 81/118 (68.64%), Query Frame = -2 Query: 427 MKGGKSKSDTR-NAKLSVNXXXXXXXXXXXXXXK--DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTK 771 MKG KSK + +AKL+V DPNKPKR SAFFVFMEEFR+++K+ +PKNKSVAAVGKA G++WKS+SE+DKAPYVAKA K K+EY K + YN+ ++ K Sbjct: 1 MKGAKSKGAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAK 118
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.645e-25 Identity = 64/115 (55.65%), Postives = 79/115 (68.70%), Query Frame = -2 Query: 439 MKGGKSKSDTR-NAKLSVNXXXXXXXXXXXXXXK---DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQA 771 MKG KSK + +AKL+V K DPNKPKR SAFFVFM EFRE++K+ +PKNKSVAAVGKA GE+WKS+SE++KAPYVAKA K K EY K + YN+ ++ Sbjct: 1 MKGAKSKGAAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGES 115
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGT_ONCMY (High mobility group-T protein OS=Oncorhynchus mykiss PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.218e-13 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -2 Query: 445 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 672 DPN PKRP+SAFF+F +FR Q K + P S+ V K GEKW +++ DK PY KA + K +YEKD+ Y + Sbjct: 90 DPNAPKRPSSAFFIFCADFRPQVKGETP-GLSIGDVAKKLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNK 164
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGB3_MOUSE (High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 5.490e-13 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -2 Query: 445 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 672 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++S+ +K PYV KA K K +YEKD+ +Y + Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADYKSK 163
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGB3_HUMAN (High mobility group protein B3 OS=Homo sapiens GN=HMGB3 PE=1 SV=4) HSP 1 Score: 74.7146 bits (182), Expect = 7.170e-13 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = -2 Query: 445 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 672 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++++++K PY+ KA K K +YEKD+ +Y + Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSK 163
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGB3_BOVIN (High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 7.170e-13 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -2 Query: 445 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 672 DPN PKRP S FF+F EFR + K +P S+ V K GE W ++S+++K PY+ KA K K +YEKD+ +Y + Sbjct: 89 DPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADYKSK 163
BLAST of CX671671 vs. ExPASy Swiss-Prot
Match: HMGB3_CHICK (High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.223e-12 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = -2 Query: 445 DPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 672 DPN PKRP SAFF+F EFR + K +P S+ V K GE W ++S+ +K PY KA K K +YEKD+ +Y + Sbjct: 89 DPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSK 163 The following BLAST results are available for this feature:
BLAST of CX671671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671671 ID=CX671671; Name=CX671671; organism=Citrus sinensis; type=EST; length=838bpback to top |