CX671665
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671665 vs. ExPASy Swiss-Prot
Match: VPS41_SOLLC (Vacuolar protein sorting-associated protein 41 homolog OS=Solanum lycopersicum GN=VPS41 PE=2 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 7.807e-73 Identity = 135/203 (66.50%), Postives = 159/203 (78.33%), Query Frame = -3 Query: 232 EHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAVCLTNEEDDARAKRVGSRASQATEKVPTVRTMEVKSKTRGGARCCMCFDPFSIQNVSVIVFFCCHAYHMDCLKDSMQTVNGKKGAGATHREPISEYEYDNGV--EYENDDDDDE----AQSGAPRMRCILCTTAA 822 EHTVGNLDPLYIVNM+PN LEIPRLRDRLVKI+TDYRTETSLRHGCNDILKAD VNLLVKYYKEA+R VCL++E DD ++R S E+ +++++EVKSKTRGG RCC+CFDPFSI NVS+I FFCCHAYH CL +S +V GKK AG + S EY NGV +YE++D+++E A SGA MRCILCTTAA Sbjct: 757 EHTVGNLDPLYIVNMLPNDLEIPRLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYKEAKRGVCLSDEVDDVSSRRGEKSVSHLGERTMSLKSVEVKSKTRGGGRCCICFDPFSILNVSIIAFFCCHAYHTTCLMESSISVGGKKEAGVAAQRTTSYDEYPNGVNDDYEDEDEEEEEEEDATSGALPMRCILCTTAA 959
BLAST of CX671665 vs. ExPASy Swiss-Prot
Match: VPS41_ARATH (Vacuolar protein sorting-associated protein 41 homolog OS=Arabidopsis thaliana GN=VPS41 PE=2 SV=3) HSP 1 Score: 254.603 bits (649), Expect = 4.901e-67 Identity = 130/208 (62.50%), Postives = 151/208 (72.60%), Query Frame = -3 Query: 229 EHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADIVNLLVKYYKEARRAVCLTNEEDDARAKRVGSRAS-----QATEKVPTVRTMEVKSKTRGGARCCMCFDPFSIQNVSVIVFFCCHAYHMDCLKDSMQTVNGKKGAGATHREPISEYEYDNGV-----EYENDDDDDEAQSGAPRMRCILCTTAAS 822 EHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKI+TDYRTETSLRHGCNDILK DIVNLLVK + EARR VCL++E+DD+RAKR + S +K +++ EVKSKTRG RCCMCFDP SI+ +V+VFFCCHAYH CL D+ + N K T EY YDNGV + E D+D D + G R+RCILCTTAA+ Sbjct: 772 EHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIVTDYRTETSLRHGCNDILKTDIVNLLVKCFNEARRGVCLSHEDDDSRAKREDNNRSSFSQRMVVDKSLSIKMTEVKSKTRGDTRCCMCFDPVSIRGDTVVVFFCCHAYHETCLMDAAFSNNNHK---TTKGSSGYEYSYDNGVDEEEEDEEEDEDGDGDRPGRSRLRCILCTTAAA 976 The following BLAST results are available for this feature:
BLAST of CX671665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671665 ID=CX671665; Name=CX671665; organism=Citrus sinensis; type=EST; length=824bpback to top |