CX671650

Overview
NameCX671650
Unique NameCX671650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD1_ARATH (Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2)

HSP 1 Score: 338.191 bits (866), Expect = 3.265e-92
Identity = 185/274 (67.52%), Postives = 203/274 (74.09%), Query Frame = 1
Query:   10 SPCSSSSK--------HYKTQLFSDFIVVPRKSCFSTWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSLAGKPLANDHSEPQEIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            SP SSSS              LFS  +  PRKS FS    QV+ R  A KH QL +SNG   N  SLQDS  G  L  +H    E             STLSITVVGASGDLAKKKIFPALFAL+YE CLP+DF+VFGYARTKLT EELR+MIS TLTCRID++E C DKM+QFLKRCFYHSG Y+SEE FAEL+ +LKEKEAGK+SNRL+YLSIPPNIFVDV +CASLRASS  GWTRVIVEKPFGRDSESSGELTR LKQYL E+QIFRIDH
Sbjct:   10 SPSSSSSSLATAASPFKETLPLFSRSLTFPRKSLFS----QVRLRFFAEKHSQLDTSNGCATNFASLQDS--GDQLTEEHVTKGE-------------STLSITVVGASGDLAKKKIFPALFALFYEGCLPQDFSVFGYARTKLTHEELRDMISSTLTCRIDQREKCGDKMEQFLKRCFYHSGQYNSEEDFAELNKKLKEKEAGKISNRLYYLSIPPNIFVDVVRCASLRASSENGWTRVIVEKPFGRDSESSGELTRCLKQYLTEEQIFRIDH 264          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PDC_SOLTU (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.791e-90
Identity = 175/275 (63.64%), Postives = 208/275 (75.64%), Query Frame = 1
Query:    7 LSPCSSSSK-------HYKTQLF-SDFIVVPRKSCFSTWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQDSLAGKPLANDHSEPQEIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            L+PCSSSS        H  T  F   F  +P ++    WVS + SRI  RKHF++ SSNG PLNAVS+QD               ++  +   S +   +T+SITV+GASGDLAKKKI PALFAL+YEDCLPE+F VFGY+RTKL+DEELRNMIS TLTCRIDK+ENC+ KM+ FL+RCFYHSG Y+SE+ FAELD +LKEKE  ++SNRLFYLSIPPNIFVDV +CASL+ASS +GWTRVIVEKPFGRD ESS ELTRSLK+YL E+QIFRIDH
Sbjct:    7 LNPCSSSSAATSPSTFHNGTPYFCKKFNFLPFRTQPLNWVSGIYSRIQPRKHFEVFSSNGFPLNAVSVQDV--------------QVPLTELGSGD---TTVSITVIGASGDLAKKKILPALFALFYEDCLPENFVVFGYSRTKLSDEELRNMISTTLTCRIDKRENCDAKMEHFLERCFYHSGQYNSEDDFAELDYKLKEKEGCRVSNRLFYLSIPPNIFVDVVRCASLKASSTSGWTRVIVEKPFGRDLESSSELTRSLKKYLTEEQIFRIDH 264          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PDC_SPIOL (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 2.266e-85
Identity = 156/219 (71.23%), Postives = 182/219 (83.11%), Query Frame = 1
Query:  154 SNGHPLNAVSLQDSLAGKPLANDHSEPQ-EIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            SNGHPLN VSLQ+ +A  P+     +P  +++      S K   TLSI VVGASGDLAKKKIFPALFAL+YE+CLPE+FTVFG++RT++ DEELR MISKTLTCRID++ENC +KMD FL+RCFYHSG Y+SE+ F+ LD +LKEKEAG+L NRLFYLSIPPNIFVDV +C S RASSA+GWTRVIVEKPFGRDS+SS ELTRS KQYL EDQIFRIDH
Sbjct:   42 SNGHPLNDVSLQNDVAVNPIVAKSIDPSADLQLLPLLESVKEEPTLSIIVVGASGDLAKKKIFPALFALFYENCLPENFTVFGFSRTEMNDEELRTMISKTLTCRIDQRENCGEKMDHFLQRCFYHSGQYNSEDDFSGLDCKLKEKEAGRLQNRLFYLSIPPNIFVDVVRCVSHRASSASGWTRVIVEKPFGRDSDSSRELTRSFKQYLSEDQIFRIDH 260          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PDC_TOBAC (Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 7.290e-84
Identity = 160/246 (65.04%), Postives = 185/246 (75.20%), Query Frame = 1
Query:  115 SRIHARKHFQLKSSNGHPLNAVSLQDSLAGKPLANDHSE---------------PQEIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            S I +RK   L+ +     NAV +QD     P +   +E               P+E + ++   S K  ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGYAR+K+TD ELRNM+SKTLTCRIDK+ENC +KM+QFL+RCFYHSG Y S E+FAELD +LKE EAG+ SNRLFYLSIPPNIF++  +CASL ASSA GWTRVIVEKPFGRDSESS  LTRSLKQYL EDQIFRIDH
Sbjct:   38 SSILSRKFGSLQINQKPFWNAVRMQDGAVATPPSKIENETPLKKLKNGILPVAPPKEQKDTIDFDSNKAKSTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRNMVSKTLTCRIDKRENCGEKMEQFLERCFYHSGQYDSLENFAELDKKLKEHEAGRFSNRLFYLSIPPNIFINAVRCASLSASSAHGWTRVIVEKPFGRDSESSAALTRSLKQYLNEDQIFRIDH 283          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD2_ARATH (Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=2 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 9.853e-81
Identity = 145/198 (73.23%), Postives = 167/198 (84.34%), Query Frame = 1
Query:  238 EIEASVTASSEKVG--------STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            E+ ++++  + KVG        ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGY+R+K+TD ELRNM+SKTLTCRIDK+ NC +KM++FLKRCFYHSG Y S+EHF ELD +LKE EAG++SNRLFYLSIPPNIFVD  KCAS  ASS  GWTRVIVEKPFGRDSE+S  LT+SLKQYL EDQIFRIDH
Sbjct:   86 EVLSALSQEAAKVGVESDGQSQSTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYSRSKMTDVELRNMVSKTLTCRIDKRANCGEKMEEFLKRCFYHSGQYDSQEHFTELDKKLKEHEAGRISNRLFYLSIPPNIFVDAVKCASTSASSVNGWTRVIVEKPFGRDSETSAALTKSLKQYLEEDQIFRIDH 283          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD3_ARATH (Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana GN=At1g24280 PE=2 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.683e-78
Identity = 155/270 (57.41%), Postives = 195/270 (72.22%), Query Frame = 1
Query:   28 SKHYKTQLFSDFIVVPRKSCFSTWVSQVQSRIHARKHFQLKSSNGHPLNAVSLQD-SLAGKPLANDHSEPQEIEASVTASSEKVG---------STLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            S H+ + L +  +V PR+S    + S     ++  +   ++S      ++V +QD S+A +  +++ ++   +    +  ++KV          ST+SITVVGASGDLAKKKIFPALFALYYE CLPE FT+FGYAR+K+TD ELR M+SKTLTCRIDK+ NC +KM++FLKRCFYHSG Y S+EHF  LD +LKE E G+LSNRLFYLSIPPNIFVD  KCAS  ASS  GWTRVIVEKPFGRDS++S  LT+SLKQYL EDQIFRIDH
Sbjct:   21 SNHHHSSLIN--VVDPRRSLSFHYASP--QGLNLAELCVVRSQRRSVQSSVVVQDGSVATESSSSEEAKDVGVLTIPSLEADKVVAESDGGEQLSTVSITVVGASGDLAKKKIFPALFALYYEGCLPEHFTIFGYARSKMTDAELRVMVSKTLTCRIDKRANCGEKMEEFLKRCFYHSGQYDSQEHFVALDEKLKEHEGGRLSNRLFYLSIPPNIFVDAVKCASSSASSVNGWTRVIVEKPFGRDSKTSAALTKSLKQYLEEDQIFRIDH 286          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD4_ARATH (Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.308e-47
Identity = 95/192 (49.48%), Postives = 127/192 (66.15%), Query Frame = 1
Query:  232 PQEIEASVTASSEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            P   + S   S  +  ++L I VVGA+G+LA+ KIFPALFALYY   LPED  +FG +R  LTDE+LR++I+ TLTCR+D +ENC  KMD F  R +Y +G Y++ +  + L  R+K+ E    +NR+FYLS+P    VDVA      A +  GWTR+IVEKPFG +S SS +LT+SL     E QI+RIDH
Sbjct:  136 PVSKQLSDDLSDVRRRASLCIAVVGATGELARGKIFPALFALYYSGYLPEDVAIFGVSRKNLTDEDLRSIIASTLTCRVDHQENCGGKMDAFQSRTYYINGGYNNRDGMSRLAERMKQIEGESEANRIFYLSVPQEALVDVACTIGDNAQAPRGWTRIIVEKPFGFNSHSSHQLTKSLLSKFEEKQIYRIDH 327          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_MEDSA (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.489e-36
Identity = 87/184 (47.28%), Postives = 113/184 (61.41%), Query Frame = 1
Query:  283 TLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFT-VFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGK-----LSNRLFYLSIPPNIFVDVAKCAS---LRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            TLSI V+GASGDLAKKK FPALF LY ++ LP D   +FGYAR+K++D+ELRN +   L           D + +FL+   Y SG Y SE+ F  LD  + E E  K      S RLFYL++PP+++  V K      +  S   GWTRV+VEKPFGRD ES+ EL+  + +   E QI+RIDH
Sbjct:   29 TLSIVVLGASGDLAKKKTFPALFHLYKQELLPPDEVHIFGYARSKISDDELRNKLRSYLVPEKGASPKQLDDVSKFLQLVKYVSGPYDSEDGFRLLDKEISEHEYLKNSKEGSSRRLFYLALPPSVYPSVCKMIKTCCMNKSDLGGWTRVVVEKPFGRDLESAEELSTQIGELFEEPQIYRIDH 212          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD6_ARATH (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=ACG12 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.809e-35
Identity = 87/185 (47.03%), Postives = 118/185 (63.78%), Query Frame = 1
Query:  286 LSITVVGASGDLAKKKIFPALFALYYEDCL-PEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCE--DKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGK-----LSNRLFYLSIPPNIFVDVAKCAS---LRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            LSI V+GASGDLAKKK FPALF LY +  L P++  +FGYARTK++DEELR+ I   L   +D+K N E  + + +FL+   Y SG Y +EE F  LD  + E E  K      S RLFYL++PP+++  V K      +  S   GWTR++VEKPFG+D ES+ +L+  + +   E QI+RIDH
Sbjct:   32 LSIIVLGASGDLAKKKTFPALFNLYRQGFLNPDEVHIFGYARTKISDEELRDRIRGYL---VDEK-NAEQAEALSKFLQLIKYVSGPYDAEEGFQRLDKAISEHEISKNSTEGSSRRLFYLALPPSVYPSVCKMIKTCCMNKSDLGGWTRIVVEKPFGKDLESAEQLSSQIGELFDESQIYRIDH 212          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD5_ARATH (Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 1 OS=Arabidopsis thaliana GN=ACG9 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.809e-35
Identity = 86/186 (46.24%), Postives = 118/186 (63.44%), Query Frame = 1
Query:  283 TLSITVVGASGDLAKKKIFPALFALYYEDCL-PEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCE--DKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKL-----SNRLFYLSIPPNIFVDVAKCASL---RASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            +LSI V+GASGDLAKKK FPALF L+++  L P++  +FGYAR+K+TDEELR+ I   L   +D+K   +  + + +FLK   Y SG Y SEE F  LD  + E E  K      S RLFYL++PP+++  V+K         S   GWTR++VEKPFG+D ES+ +L+  +     E QI+RIDH
Sbjct:   31 SLSIIVLGASGDLAKKKTFPALFNLFHQGFLNPDEVHIFGYARSKITDEELRDKIRGYL---VDEKNASKKTEALSKFLKLIKYVSGPYDSEEGFKRLDKAILEHEISKKTAEGSSRRLFYLALPPSVYPPVSKMIKAWCTNKSDLGGWTRIVVEKPFGKDLESAEQLSSQIGALFEEPQIYRIDH 213          
The following BLAST results are available for this feature:
BLAST of CX671650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
G6PD1_ARATH3.265e-9267.52Glucose-6-phosphate 1-dehydrogenase 1, chloroplast... [more]
G6PDC_SOLTU1.791e-9063.64Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PDC_SPIOL2.266e-8571.23Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PDC_TOBAC7.290e-8465.04Glucose-6-phosphate 1-dehydrogenase, chloroplastic... [more]
G6PD2_ARATH9.853e-8173.23Glucose-6-phosphate 1-dehydrogenase 2, chloroplast... [more]
G6PD3_ARATH2.683e-7857.41Glucose-6-phosphate 1-dehydrogenase 3, chloroplast... [more]
G6PD4_ARATH9.308e-4749.48Glucose-6-phosphate 1-dehydrogenase 4, chloroplast... [more]
G6PD_MEDSA1.489e-3647.28Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]
G6PD6_ARATH2.809e-3547.03Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]
G6PD5_ARATH2.809e-3546.24Glucose-6-phosphate 1-dehydrogenase, cytoplasmic i... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C12-F24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671650 ID=CX671650; Name=CX671650; organism=Citrus sinensis; type=EST; length=809bp
GCACATTTGAGTCCTTGCTCTTCTTCATCGAAGCATTACAAGACGCAACT
CTTTAGCGACTTCATTGTTGTCCCAAGAAAATCTTGTTTCTCCACTTGGG
TATCTCAAGTTCAGTCAAGAATCCATGCTAGAAAGCATTTTCAGCTCAAA
TCCTCTAATGGGCATCCTCTTAATGCTGTTTCTTTGCAAGATAGTTTAGC
TGGAAAACCTCTGGCCAACGATCATTCCGAGCCTCAAGAGATAGAGGCCT
CCGTTACTGCATCATCTGAAAAAGTGGGTTCTACACTCAGCATAACAGTT
GTTGGAGCCTCAGGAGACCTTGCAAAGAAGAAGATTTTTCCTGCACTTTT
CGCCCTATACTATGAAGACTGTCTACCTGAGGATTTTACAGTTTTTGGTT
ATGCTCGGACTAAATTGACTGATGAGGAGCTGAGGAACATGATTAGCAAA
ACTTTAACTTGTAGAATTGATAAGAAGGAAAATTGTGAAGACAAAATGGA
TCAGTTCTTGAAGAGATGCTTTTACCATTCCGGTCTGTACAGCTCTGAGG
AGCATTTTGCAGAATTAGACAGCAGATTGAAAGAGAAAGAGGCTGGAAAG
CTATCGAACAGGTTGTTTTACTTATCAATACCTCCAAACATTTTTGTGGA
TGTGGCGAAATGCGCTAGCCTTAGAGCTTCATCAGCAACTGGTTGGACAA
GAGTCATTGTTGAAAAACCATTTGGTCGGGACTCTGAGTCTTCTGGCGAG
TTAACTAGAAGTTTGAAGCAGTATCTAAGAGAGGATCAAATATTCAGGAT
TGACCATTA
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