FC871775

Overview
NameFC871775
Unique NameFC871775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.596e-99
Identity = 184/189 (97.35%), Postives = 187/189 (98.94%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR DILKIHSR+MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR+HVTQEDFEMAVAKVMKK+TEKNMSLRKLWK
Sbjct:  231 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.596e-99
Identity = 184/189 (97.35%), Postives = 187/189 (98.94%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR DILKIHSR+MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR+HVTQEDFEMAVAKVMKK+TEKNMSLRKLWK
Sbjct:  231 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 1.745e-87
Identity = 160/189 (84.66%), Postives = 177/189 (93.65%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ YIGEGSRMVRELF+MAREHAPSIIFMDEIDSIGS+R ESGSG GDSEVQRTMLELLNQLDGFE++  IKVLM TNRIDILD ALLRPGRIDRKIEFPNP +  RLDILKIHSR+MNL RGI+LKKI++KMNGASGAELKAVCTEAGM+ALRERR+HV+QEDFEMAV+KVMKK++E+NMS+ KLWK
Sbjct:  215 LVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKKDSEQNMSINKLWK 403
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.478e-86
Identity = 162/189 (85.71%), Postives = 179/189 (94.71%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ +IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct:  215 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 402
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 1.478e-86
Identity = 162/189 (85.71%), Postives = 179/189 (94.71%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ +IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct:  218 LVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 405
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.615e-86
Identity = 160/189 (84.66%), Postives = 178/189 (94.18%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ +IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct:  219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.615e-86
Identity = 160/189 (84.66%), Postives = 178/189 (94.18%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ +IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct:  219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.615e-86
Identity = 160/189 (84.66%), Postives = 178/189 (94.18%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ +IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct:  219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.615e-86
Identity = 160/189 (84.66%), Postives = 178/189 (94.18%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ +IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct:  219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
[Close]
BLAST of FC871775 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 5.615e-86
Identity = 160/189 (84.66%), Postives = 178/189 (94.18%), Query Frame = 1 
Query:    1 LVQNYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 567
            LVQ +IGEG+RMVRELFVMAREHAPSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+  IKV+MATNRIDILD ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct:  219 LVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
The following BLAST results are available for this feature:
BLAST of FC871775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
PRS8B_ARATH2.596e-9997.3526S protease regulatory subunit 8 homolog B OS=Ara... [more]
PRS8A_ARATH2.596e-9997.3526S protease regulatory subunit 8 homolog A OS=Ara... [more]
PRS8_DICDI1.745e-8784.6626S protease regulatory subunit 8 OS=Dictyostelium... [more]
PRS8_MANSE1.478e-8685.7126S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_DROME1.478e-8685.7126S protease regulatory subunit 8 OS=Drosophila me... [more]
PRS8_RAT5.615e-8684.6626S protease regulatory subunit 8 OS=Rattus norveg... [more]
PRS8_PIG5.615e-8684.6626S protease regulatory subunit 8 OS=Sus scrofa GN... [more]
PRS8_MOUSE5.615e-8684.6626S protease regulatory subunit 8 OS=Mus musculus ... [more]
PRS8_HUMAN5.615e-8684.6626S protease regulatory subunit 8 OS=Homo sapiens ... [more]
PRS8_BOVIN5.615e-8684.6626S protease regulatory subunit 8 OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3BE05FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3BE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871775 ID=FC871775; Name=FC871775; organism=Citrus sinensis; type=EST; length=782bp
TTAGTCCAGAACTACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTTT
TGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATGGATGAAATTG
ACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAGT
GAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTGA
AGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATTC
TCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATTT
CCAAATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAAG
AAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAGA
TGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGGT
ATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTGA
GATGGCAGTGGCCAAGGTCATGAAGAAAGAAACAGAGAAGAACATGTCCT
TGCGGAAGTTGTGGAAGTAATCATTTCCATGTGCTGTGCTGTGTATTTGC
TTATTTTCTGAGCAAGATTCAAGTAGTCCTTAACGGCACTCACTCGTGTT
CTGGGACATTTGCACGATAGGCCCTTTTAGCCTGACTGTTGTCTTTTCTT
GCGCTCTAGCCTCTTATGATAAACAAATTTGCAATCTATTTTATCTAAAT
TTAAATTCGCATGCAAAAAAAAAAAAAAAAAA
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