CX671639
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671639 vs. ExPASy Swiss-Prot
Match: VPS35_HUMAN (Vacuolar protein sorting-associated protein 35 OS=Homo sapiens GN=VPS35 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 4.435e-37 Identity = 93/222 (41.89%), Postives = 134/222 (60.36%), Query Frame = -1 Query: 226 EMALRLYLQCAEAANDCDLE---PVAYEFFTQAFMLYEEEIADSKAQVTAIHLIIGTLQRISVFGVENRDTLTHKATGYSARLLKKPDQCRAVYACSHLFWV---DDQDG--IKDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILNKYLYFFEKGNTQITASAIQSLIELITSEMQS-ESTTLDPAANAFFASTKRYIEFQKKKGGAMGEKYD 864 E+ LRL+LQ A AA + E VAYEF +QAF LYE+EI+DSKAQ+ AI LIIGT +R+ F EN + L + +++LLKKPDQ RAV C+HLFW D++G + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+EK N +T + LI+ I ++ + ES+ N F +T ++ +++ + G Y+ Sbjct: 578 ELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMD-------PSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYE 792
BLAST of CX671639 vs. ExPASy Swiss-Prot
Match: VPS35_BOVIN (Vacuolar protein sorting-associated protein 35 OS=Bos taurus GN=VPS35 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.435e-37 Identity = 93/222 (41.89%), Postives = 134/222 (60.36%), Query Frame = -1 Query: 226 EMALRLYLQCAEAANDCDLE---PVAYEFFTQAFMLYEEEIADSKAQVTAIHLIIGTLQRISVFGVENRDTLTHKATGYSARLLKKPDQCRAVYACSHLFWV---DDQDG--IKDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILNKYLYFFEKGNTQITASAIQSLIELITSEMQS-ESTTLDPAANAFFASTKRYIEFQKKKGGAMGEKYD 864 E+ LRL+LQ A AA + E VAYEF +QAF LYE+EI+DSKAQ+ AI LIIGT +R+ F EN + L + +++LLKKPDQ RAV C+HLFW D++G + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+EK N +T + LI+ I ++ + ES+ N F +T ++ +++ + G Y+ Sbjct: 578 ELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMD-------PSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYE 792
BLAST of CX671639 vs. ExPASy Swiss-Prot
Match: VPS35_MOUSE (Vacuolar protein sorting-associated protein 35 OS=Mus musculus GN=Vps35 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.566e-37 Identity = 93/222 (41.89%), Postives = 134/222 (60.36%), Query Frame = -1 Query: 226 EMALRLYLQCAEAANDCDLE---PVAYEFFTQAFMLYEEEIADSKAQVTAIHLIIGTLQRISVFGVENRDTLTHKATGYSARLLKKPDQCRAVYACSHLFWV---DDQDG--IKDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILNKYLYFFEKGNTQITASAIQSLIELITSEMQS-ESTTLDPAANAFFASTKRYIEFQKKKGGAMGEKYD 864 E+ LRL+LQ A AA + E VAYEF +QAF LYE+EI+DSKAQ+ AI LIIGT +R+ F EN + L + +++LLKKPDQ RAV C+HLFW D++G + G+RV+ CLK+AL+IAN S V LF+EILN+Y+YF+EK N +T + LI+ I ++ + ES+ N F +T ++ +++ + G Y+ Sbjct: 578 ELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMD-------PSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRSRRESPESEGPIYE 792
BLAST of CX671639 vs. ExPASy Swiss-Prot
Match: VPS35_SCHPO (Vacuolar protein sorting-associated protein 35 OS=Schizosaccharomyces pombe GN=vps35 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.785e-31 Identity = 75/184 (40.76%), Postives = 108/184 (58.70%), Query Frame = -1 Query: 331 SPEMALRLYLQCAEAANDCDLEPVAYEFFTQAFMLYEEEIADSKAQVTAIHLIIGTLQRISVFGVENRDTLTHKATGYSARLLKKPDQCRAVYACSHLFWV----DDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILNKYLYFFEKGNTQITASAIQSLIELITSEMQS 870 S E+ L LYL AE A+ + AYEFFTQAF +YEE + DS+ Q + +IIG LQ+ F V++ DTL K T Y+++LLKKPDQC +Y SHL+W +D +D +RVL CL+++L+IA+A + LF+ IL +Y Y++++ I A I LI+L M+S Sbjct: 551 SLELCLALYLSAAEMADQENYPDFAYEFFTQAFSIYEESVLDSELQYQQLLMIIGKLQKTRNFSVDDYDTLITKCTLYASKLLKKPDQCCGIYLASHLWWQVASGEDSRPFQDPKRVLECLQKSLKIADACMDQLTSLK-------LFINILERYFYYYDQHCESIIAKHISGLIDLTEQNMRS 727
BLAST of CX671639 vs. ExPASy Swiss-Prot
Match: VPS35_YEAST (Vacuolar protein sorting-associated protein 35 OS=Saccharomyces cerevisiae GN=VPS35 PE=1 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.446e-29 Identity = 75/193 (38.86%), Postives = 119/193 (61.66%), Query Frame = -1 Query: 331 EMALRLYLQCAEAANDCDLEPVAYEFFTQAFMLYEEEIADSKAQVTAIHLIIGTLQRI-SVFGVENRDTLTHKATGYSARLLKKPDQCRAVYACSHLFW------VDDQDGI-----KDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILNKYLYFF---EKGNTQITASAIQSLIELITSEMQS 864 ++ L+L LQCA A+ L ++Y+FF+QAF ++EE ++DSK Q+ A+ I +LQ+ S++ D+L + T + ++LLKK DQCRAVY CSHL+W + +++GI +DG+RVL CL+R+LR+A++ + L VEILN+ LY+F ++ T I+ I LIELI + ++S Sbjct: 647 DLILKLNLQCAILADQLQLNEISYDFFSQAFTIFEESLSDSKTQLQALIYIAQSLQKTRSLYKEAYYDSLIVRCTLHGSKLLKKQDQCRAVYLCSHLWWATEISNIGEEEGITDNFYRDGKRVLECLQRSLRVADSIMD-------NEQSCELMVEILNRCLYYFIHGDESETHISIKYINGLIELIKTNLKS 832
BLAST of CX671639 vs. ExPASy Swiss-Prot
Match: VPS35_DICDI (Vacuolar sorting protein 35 OS=Dictyostelium discoideum GN=vps35 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.061e-22 Identity = 68/206 (33.01%), Postives = 112/206 (54.37%), Query Frame = -1 Query: 250 EMALRLYLQCAEAANDCDLEPVAYEFFTQAFMLYEEEIADSKAQVTAIHLIIGTLQRISVFGVENRDTLTHKATGYSARLLKKPDQCRAVYACSHLFWVDDQD-GIKDGERVLLCLKRALRIANAAQQMANVARGSSGPVVLFVEILNKYLYFFEKGNTQITASAIQSLIELITSEMQSESTTLDPAANAFFASTKRYIEFQKKKG 864 +++ RLYLQ + + C L E +A ++++E+IAD KAQV A+ L+I TL +S+ E ++L + ++RLL DQ + + CSHLFWVD+ ++ + VL LK+AL I ++ SS + FV+ILN+ L++ +K + + L+ELI + E+ DPA + +T +YI+ Q KG Sbjct: 586 DLSFRLYLQALQTFDHCGLVSRVKELAIKALLIFQEDIADFKAQVMALQLLISTLNSLSIPNEEIYESLAAQTIKQASRLLLPQDQAKLISTCSHLFWVDNPSRQYQNPDSVLQALKKALSI---------ISNESSPGLGTFVDILNECLFYCDKETDAVPIQFVSDLVELIRTTHVKEA---DPAL-PYLQNTIKYIQSQNYKG 778 The following BLAST results are available for this feature:
BLAST of CX671639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671639 ID=CX671639; Name=CX671639; organism=Citrus sinensis; type=EST; length=873bpback to top |