CX043626

Overview
NameCX043626
Unique NameCX043626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX043626 vs. ExPASy Swiss-Prot
Match: ZDH22_ARATH (S-acyltransferase TIP1 OS=Arabidopsis thaliana GN=TIP1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.083e-37
Identity = 74/99 (74.75%), Postives = 83/99 (83.84%), Query Frame = 3 
Query:    3 FFLFFGVAVLTAVQASQISRNITTNEMANALRYNYLRGAGGRFRNPYDHGCKRNCSDFLINGFNEDVECIEDSA--GTEGIGMMHMSRNSNLQNGDGHM 293
            F LFF VAVLT +QASQISRNITTNEMANALRY+YLRG GGRFRNPYD GC+RNCSDFL+ G+NED+EC E+ A    EGI MM M RN NLQNG+GH+
Sbjct:  470 FCLFFSVAVLTVIQASQISRNITTNEMANALRYSYLRGPGGRFRNPYDLGCRRNCSDFLVKGYNEDIECHEEDATQRPEGISMMQMQRNPNLQNGNGHV 568
[Close]
BLAST of CX043626 vs. ExPASy Swiss-Prot
Match: ZDHC2_ARATH (Probable S-acyltransferase At2g14255 OS=Arabidopsis thaliana GN=At2g14255 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.516e-16
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 3 
Query:    9 LFFGVAVLTAVQASQISRNITTNEMANALRYNYLRGAGGRFRNPYDHGCKRNCSDFLINGFNEDVECIEDS 221
            +F     LT  Q+  I+RNITTNE+ NA R++YLRG  GRF NPY+HG +RNC+DFL++G+  D E +  S
Sbjct:  464 IFIATMTLTISQSYMIARNITTNELWNAKRFSYLRGPDGRFYNPYNHGLRRNCTDFLVHGYTRDDEVVPSS 534
The following BLAST results are available for this feature:
BLAST of CX043626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ZDH22_ARATH2.083e-3774.75S-acyltransferase TIP1 OS=Arabidopsis thaliana GN=... [more]
ZDHC2_ARATH4.516e-1652.11Probable S-acyltransferase At2g14255 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS07_12D02_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12D02-G4-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043626 ID=CX043626; Name=CX043626; organism=Citrus sinensis; type=EST; length=660bp
ATTTTTTCCTCTTCTTTGGCGTGGCTGTTTTGACAGCTGTTCAAGCTTCT
CAGATATCTCGCAATATAACAACTAATGAAATGGCAAATGCACTACGATA
CAACTACCTAAGGGGTGCCGGTGGTCGCTTTAGAAATCCTTATGACCATG
GGTGCAAGAGGAACTGCTCTGATTTCTTAATCAATGGCTTCAATGAAGAT
GTGGAGTGCATTGAAGATTCAGCTGGTACTGAGGGGATTGGAATGATGCA
TATGTCAAGGAATTCAAATTTGCAAAATGGGGATGGTCATATGCATCATG
CCAATGGCAATGGCCATGTCGCTATCAATGTGAATTCAAACAACACAAAC
TCACATCATGGTCATCTCCATTCTTCTCATTGCAACCACAGTAACCATGG
GAAATCCAAAACTGATAGCGTTCCACTAGGTTTGGGTCTTGGTCTTGGGC
GCAGTTCTGCACGTTCTGTTGTGGCTTCATGATGTAAGCATCTGAGTACA
TTAGAACCTGAGATTGCTGTGTATTGTATTATAATATCTGCGTTAGCTTC
AATTTTTAATCGATTGTTGCTCCTTTTTGGTACCAAAGGGGAGCTCTTAA
TTCTTGTTCACGGTTGTTTTTGAGTGAATGATTTTAGTTGCAGGATTCAG
CATAAAAGCC
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