EG358274

Overview
NameEG358274
Unique NameEG358274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6857 contig Csv1_Contig6857:1..668. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAT (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=USA300HOU_0879 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 55/137 (40.15%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  SE+++    +A VK++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAE (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain Newman) GN=NWMN_0792 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 55/137 (40.15%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  SE+++    +A VK++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAC (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain COL) GN=SACOL0922 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 55/137 (40.15%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  SE+++    +A VK++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA8 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00855 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 55/137 (40.15%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  SE+++    +A VK++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA3 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0825 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 55/137 (40.15%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  SE+++    +A VK++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPSEQIISRLKAANVKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAS (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0791 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19
Identity = 54/137 (39.42%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  SE ++     A +K++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPSESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_NEUCR (2-nitropropane dioxygenase OS=Neurospora crassa GN=ncd-2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.436e-19
Identity = 61/179 (34.08%), Postives = 95/179 (53.07%), Query Frame = 3
Query:  207 RKTRSLTERPF----GVGVVLAFPHNENIKAILSEKVAVL-----QVSW---------------GEYSEELVLEA-HSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGHVIGQ-DGLISLLPMVVDLIG----DRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEES 653
            R    LT+RP     G+GV L   H  ++  +    + +L     Q  W                + + + ++EA H++G  V  QVG+  +ARKA   G D I+ QG +AGGH +    G++SL+P V D++     +R++ ++AAGG+ D RG V AL LGA+G+ LGTRF  + E+
Sbjct:   83 RSRLGLTDRPLTPLPGIGVGLILTHTISVPYVTDTVLPILIEHSPQAVWLFANDPDFEASSEPGAKGTAKQIIEALHASGFVVFFQVGTVKDARKAAADGADVIVAQGIDAGGHQLATGSGIVSLVPEVRDMLDREFKEREVVVVAAGGVADGRGVVGALGLGAEGVVLGTRFTVAVEA 261          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAR (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0883 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.487e-19
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  +E ++     A +K++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPNESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAN (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain N315) GN=SA0781 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.861e-19
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  +E ++     A +K++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA9 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain JH9) GN=SaurJH9_0919 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.861e-19
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  +E ++     A +K++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
The following BLAST results are available for this feature:
BLAST of EG358274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
2NPD_STAAT6.923e-2040.15Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAAE6.923e-2040.15Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAAC6.923e-2040.15Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAA86.923e-2040.15Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAA36.923e-2040.15Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAAS2.014e-1939.42Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_NEUCR3.436e-1934.082-nitropropane dioxygenase OS=Neurospora crassa GN... [more]
2NPD_STAAR4.487e-1938.69Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAAN5.861e-1938.69Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAA95.861e-1938.69Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank description4c10 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004c10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358274 ID=EG358274; Name=EG358274; organism=Citrus sinensis; type=EST; length=668bp
ACGCGGGGACAGTTCATTTGTATACTTTGAAGTTTACTCTAATGGGTTGG
AGAGGAATGCTGGGTTTCGAGTATGGGATTGTTCAGGCACCATTGGGACC
TGATATTTCAGGCCCGGAGCTTGTAGCTGCTGTTGCTAATGCCGGTGGTC
TTGGTCTTCTTAGAGCCCCCGATTGGGAAGCACCAGATTACTTGAGGGAT
CTGATAAGGAAGACAAGATCATTAACAGAGCGACCATTTGGGGTTGGTGT
GGTTCTAGCATTTCCCCACAACGAAAATATAAAGGCTATACTTAGTGAAA
AAGTAGCAGTTTTGCAAGTTTCCTGGGGTGAATATTCAGAGGAGCTCGTT
CTTGAAGCTCATAGTGCTGGAGTCAAAGTTGTCCCCCAAGTTGGGAGTTT
TGACGAAGCAAGAAAAGCAGTTAACGCAGGTGTAGATGCAATTATAGTCC
AAGGACGTGAAGCTGGGGGCCATGTAATTGGACAGGATGGTTTGATTTCC
TTATTGCCAATGGTGGTTGATCTTATCGGGGATCGAGATATTCCAATAAT
TGCTGCAGGTGGTATTGTGGATGCACGTGGTTATGTTGCAGCCCTGTCTC
TTGGTGCTCAAGGCATCTGCTTAGGCACAAGGTTTGTGGCAAGTGAGGAA
AGCTATGCGCATCCTGAG
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