EY680240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: RH38_ARATH (DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana GN=RH38 PE=2 SV=2) HSP 1 Score: 305.834 bits (782), Expect = 1.962e-82 Identity = 163/246 (66.26%), Postives = 192/246 (78.05%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKR-PPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC*RL*STFCQEKRVVI*NQ*SSIKFYCPDELAKVMVIRGKIFGTG 736 DLNLSPEL+KGLYVEMKF+KPSKIQAISLPMI+TPP+++LIAQA NGSGKTTCFVLGMLSRVDP L+ PQALCICPTRELA QN+EVL+KMGK TGIT+E AVP DST P + R PV+A VVIGTPGT+KKWM+ K+LG + LKILV+DEADHML GFRDDSL+IMKDI R + + QVLLFSATFNETVK+FV R F + + + + + K CP E K+ VI+ +I G Sbjct: 95 DLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVP-DSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLAL-DSVKQYKVVCPKEQNKIEVIKDQIMELG 338
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: RH38_ORYSJ (DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica GN=Os03g0158200 PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 9.738e-82 Identity = 156/249 (62.65%), Postives = 190/249 (76.31%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC*RL*STFCQEKRVVI*NQ*SSIKFYCPDELAKVMVIRGKIFGTGKKKG 748 DL L+PELLKGL+ EM F +PSKIQA++LPMILTPPY++LIAQA NGSGKTTCFVLGMLSRVDPN K QA+CICPTRELA QN VL +MGK TGIT CA+P +YVPI+K P +T QVVIGT GT+ KW++ KK+ + +KILV+DEADHML E GFR DS RIM+DI+RS+G CQVLLFSATFNE VK+FVTR+ F +++ + + + K PDE AK+ VI+ KIF G+K G Sbjct: 104 DLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGITCACAIPPAQKDYVPIAKMPKITDQVVIGTSGTLMKWINHKKILTNDIKILVFDEADHMLAEDGFRSDSERIMRDIQRSAGGCQVLLFSATFNERVKDFVTRVIKDGNQIFVKKEELTL-EKVKQYKVQVPDERAKIAVIKDKIFEFGQKVG 351
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_KLULA (ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis GN=DBP5 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.581e-45 Identity = 93/200 (46.50%), Postives = 135/200 (67.50%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L LS ELLKGLY MKFQKPSKIQ +LP+++ P N+IAQ+++G+GKT F L ML+RVDPN+ + QA+C+ P RELA Q LEV+++MGK T +S+ VP + P+TA +V+GTPGT+ + K L +K+ V DEAD+MLD+ G D +R+ K + ++ CQ++LFSATF++ V+ + +I Sbjct: 83 ELGLSEELLKGLYA-MKFQKPSKIQEKALPLLIRDPPHNMIAQSQSGTGKTAAFSLTMLTRVDPNVNSTQAICLSPARELARQTLEVIQEMGKFTKTSSQLVVPDS------FERNKPITANIVVGTPGTVLDLIRRKMLNLGSIKVFVLDEADNMLDKQGLGDQCIRVKKFLPKT---CQLVLFSATFDDGVRQYAKKI 272
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_CANAL (ATP-dependent RNA helicase DBP5 OS=Candida albicans GN=DBP5 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.624e-44 Identity = 98/200 (49.00%), Postives = 134/200 (67.00%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L LSPELLKGLY MKF KPSKIQ +LP++L+ P RN+I Q+++G+GKT F L MLSRVDP +K PQ LC+ PTRELA Q LEV+ MGK T IT++ VP N +P + V AQV++GTPG + ++L S++K+ V DEAD+ML+ G D ++R+ K + R Q++LFSATF V+ + R+ Sbjct: 154 ELGLSPELLKGLYA-MKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLTMLSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVP----NAIP--RGSSVNAQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPRG---VQLVLFSATFPTEVREYAERL 343
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_YEAST (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae GN=DBP5 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.770e-44 Identity = 94/200 (47.00%), Postives = 136/200 (68.00%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L L+PELLKG+Y MKFQKPSKIQ +LP++L P RN+IAQ+++G+GKT F L ML+RV+P +PQA+C+ P+RELA Q LEV+++MGK T ITS+ VP K + AQV++GTPGT+ M K + ++KI V DEAD+MLD+ G D +R+ + + + + Q++LFSATF + V+ + +I Sbjct: 96 ELGLAPELLKGIYA-MKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIVPDS------FEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDT---QLVLFSATFADAVRQYAKKI 285
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_YEAS7 (ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP5 PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.770e-44 Identity = 94/200 (47.00%), Postives = 136/200 (68.00%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L L+PELLKG+Y MKFQKPSKIQ +LP++L P RN+IAQ+++G+GKT F L ML+RV+P +PQA+C+ P+RELA Q LEV+++MGK T ITS+ VP K + AQV++GTPGT+ M K + ++KI V DEAD+MLD+ G D +R+ + + + + Q++LFSATF + V+ + +I Sbjct: 96 ELGLAPELLKGIYA-MKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIVPDS------FEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDT---QLVLFSATFADAVRQYAKKI 285
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_CANGA (ATP-dependent RNA helicase DBP5 OS=Candida glabrata GN=DBP5 PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.618e-44 Identity = 95/200 (47.50%), Postives = 134/200 (67.00%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L LSPELLKG+Y MKFQKPSKIQ +LP++L+ P RN+IAQ+++G+GKT F L MLSRVD PQA+C+ P+RELA Q LEV+++MGK+T IT++ VP K + A VV+GTPGT+ + K + +KI V DEAD+MLD+ G D +R+ K + + + Q++LFSATF + VK + ++ Sbjct: 118 ELGLSPELLKGIYA-MKFQKPSKIQERALPLLLSNPPRNMIAQSQSGTGKTAAFSLTMLSRVDETQNVPQAICLAPSRELARQTLEVIQEMGKYTKITTQLIVPDS------FEKNTKINANVVVGTPGTLLDLIRRKLIQLQNVKIFVLDEADNMLDKQGLGDQCIRVKKFLPKDT---QLVLFSATFADAVKAYAQKV 307
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_LODEL (ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus GN=DBP5 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.053e-43 Identity = 91/199 (45.73%), Postives = 133/199 (66.83%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 +L L PELLKGLY MKF KPSKIQ +LP++++ P +N+I Q+++G+GKT F L MLSRVD ++KAPQ +C+ PTRELA Q LEV+ MGK++ IT + VP + + ++AQV++GTPG + ++ K + +++K+ V DEAD+MLD G D LR+ K + R CQ++LFSATF V+ + + Sbjct: 120 ELGLKPELLKGLYA-MKFNKPSKIQERALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRVDESIKAPQCICLAPTRELARQTLEVVETMGKYSNITYQLVVPDS------VPRGQAISAQVLVGTPGIVHDLINRKAINVAKVKVFVLDEADNMLDAQGLADTCLRVKKRLPRD---CQLVLFSATFPTEVRKYAEK 308
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_SCHPO (ATP-dependent RNA helicase dbp5 OS=Schizosaccharomyces pombe GN=dbp5 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.593e-42 Identity = 91/199 (45.73%), Postives = 134/199 (67.34%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 +L L PELLKG+Y MKFQKPSKIQ +LP++L+ P RN+I Q+++G+GKT F L MLSRVD ++ PQA+C+ P+RELA Q ++V+ +MGK+T + + + + K + AQ+VIGTPGT+ M ++L +K+ V DEAD+MLD+ G D S+RI + R++ Q++LFSATF+E V+ + R Sbjct: 118 ELELKPELLKGIY-SMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVKTAFGIKDS------VPKGAKIDAQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNT---QIVLFSATFSERVEKYAER 306
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_ASHGO (ATP-dependent RNA helicase DBP5 OS=Ashbya gossypii GN=DBP5 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.287e-41 Identity = 103/240 (42.92%), Postives = 147/240 (61.25%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC*RL*STFCQEKRVVI*NQ*SSIK---FYCPDELAKVMVI 712 +L L+PELLKGLY MKFQKPSKIQ +LP++L P RN+IAQ+++G+GKT F L MLSRVD + A QA+C+ P+R LA Q LEV+++MGK T I S+ VP K + A +++GTPGT+ M K + ++K V DEAD+MLD+ G D +R+ K + + + Q++LFSATF+++V+ + R+ S Q V + S+IK C DE K V+ Sbjct: 83 ELGLAPELLKGLYA-MKFQKPSKIQERALPLLLYNPPRNMIAQSQSGTGKTAAFSLTMLSRVDVAVPATQAICLAPSR-LARQTLEVIQEMGKFTKIASQLIVPDS------YEKNKAINAHIIVGTPGTVLDLMRRKMIQLGKVKTFVLDEADNMLDKQGLGDQCIRVKKFLPKDT---QLVLFSATFDDSVREYARRVVPNANSLELQRNEVNV----SAIKQLFMDCNDERHKFTVL 307 The following BLAST results are available for this feature:
BLAST of EY680240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680240 ID=EY680240; Name=EY680240; organism=Citrus sinensis; type=EST; length=856bpback to top |