CX671589

Overview
NameCX671589
Unique NameCX671589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5070 contig Csv1_Contig5070:1..833. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671589 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSI (Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.406e-53
Identity = 113/251 (45.02%), Postives = 152/251 (60.56%), Query Frame = 1
Query:   94 ASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPH-KNIVPCSNPRCAALH--WPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYI--LGPAELLYSGKSCGLKDLTLIFDSGASYAYF 828
            +S+V L   G++YP+G+F V + +G P K +  D DTGS LTW+QCD PC  C K P   YKP  K  V C+  RCA L+     P +C  P +QC Y I+Y  GGSSIG L+ D F L  SNG+     + FGCGYNQ       P    G+LGLGRG+++++SQL+  G+I ++V+GHCI   G+G LF GD KVP+SGV W+PM   + + KHY    G  +   + K      + +IFDSGA+Y YF
Sbjct:   21 SSAVVLELHGNVYPIGHFFVTMNIGDPAKPYFLDIDTGSTLTWLQCDYPCINCNKVPHGLYKPELKYAVKCTEQRCADLYADLRKPMKC-GPKNQCHYGIQY-VGGSSIGVLIVDSFSLPASNGT-NPTSIAFGCGYNQGKNNHNVPTPVNGILGLGRGKVTLLSQLKSQGVITKHVLGHCISSKGKGFLFFGDAKVPTSGVTWSPM---NREHKHYSPRQGTLQFNSNSKPISAAPMEVIFDSGATYTYF 265          
BLAST of CX671589 vs. ExPASy Swiss-Prot
Match: ASP1_ORYSJ (Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.547e-50
Identity = 108/251 (43.03%), Postives = 150/251 (59.76%), Query Frame = 1
Query:   94 ASSVFLRALGSIYPLGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKP-HKNIVPCSNPRCAALHWP--NPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLI-RNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLY--SGKSCGLKDLTLIFDSGASYAYF 828
            +S+V L   G++YP+G+F + + +G P K +  D DTGS LTW+QCDAPCT C   P   YKP  K +V C++  C  L+     P RC     QCDY I+Y D  SS+G LV D F L  SNG+     + FGCGY+Q       P     +LGL RG+++++SQL+  G+I ++V+GHCI   G G LF GD +VP+SGV WTPM   + + K+Y  G   L +  + K+     + +IFDSGA+Y YF
Sbjct:   21 SSAVVLELHGNVYPIGHFFITMNIGDPAKSYFLDIDTGSTLTWLQCDAPCTNCNIVPHVLYKPTPKKLVTCADSLCTDLYTDLGKPKRC-GSQKQCDYVIQYVD-SSSMGVLVIDRFSLSASNGT-NPTTIAFGCGYDQGKKNRNVPIPVDSILGLSRGKVTLLSQLKSQGVITKHVLGHCISSKGGGFLFFGDAQVPTSGVTWTPM---NREHKYYSPGHGTLHFDSNSKAISAAPMAVIFDSGATYTYF 265          
BLAST of CX671589 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.513e-18
Identity = 78/248 (31.45%), Postives = 113/248 (45.56%), Query Frame = 1
Query:  139 GYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHK----NIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQL--REYGLIRNVIGHCIGQNGRGVLFLGD-GKVPSSGVAWTPMLQNSADLKHYIL-------GPAELLYSGKSCGLKDLT----LIFDSGASYAYF 828
            G + +NL++G P + F    DTGSDL W QC  PCT C       + P      + +PCS+  C AL   + P C   N+ C Y   YGDG  + G++ T+   L F + S+ N+  TFGCG N    G     + AG++G+GRG +S+ SQL   ++      IG     N    L LG      ++G   T ++Q+S     Y +       G   L     +  L        +I DSG +  YF
Sbjct:   93 GEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQ-PCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQAL---SSPTCS--NNFCQYTYGYGDGSETQGSMGTE--TLTFGSVSIPNI--TFGCGENNQGFG---QGNGAGLVGMGRGPLSLPSQLDVTKFSYCMTPIGSSTPSN----LLLGSLANSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYF 323          
BLAST of CX671589 vs. ExPASy Swiss-Prot
Match: ASPL2_ARATH (Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.550e-18
Identity = 75/251 (29.88%), Postives = 107/251 (42.63%), Query Frame = 1
Query:  136 LGYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYK---------PHKNIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPL----TFGCGYNQHNPGPLSPPDTA--GVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGL-----KDLTLIFDSGASYAYF 828
            +G +   + +G PPK +    DTGSD+ W+ C  PC  C       ++              V C +  C+ +       C+ P   C Y I Y D  +S G  + D+  L    G +   PL     FGCG +Q   G L   D+A  GV+G G+   S++SQL   G  + V  HC+  N +G      G V S  V  TPM+ N     HY +    +   G S  L     ++   I DSG + AYF
Sbjct:   71 VGLYFTKIKLGSPPKEYHVQVDTGSDILWINC-KPCPKCPTKTNLNFRLSLFDMNASSTSKKVGCDDDFCSFI--SQSDSCQ-PALGCSYHIVYADESTSDGKFIRDMLTLEQVTGDLKTGPLGQEVVFGCGSDQ--SGQLGNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCL-DNVKGGGIFAVGVVDSPKVKTTPMVPNQ---MHYNVMLMGMDVDGTSLDLPRSIVRNGGTIVDSGTTLAYF 311          
BLAST of CX671589 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.629e-17
Identity = 73/248 (29.44%), Postives = 110/248 (44.35%), Query Frame = 1
Query:  139 GYFAVNLTVGKPPKLFDFDFDTGSDLTWVQCDAPCTGCTKPPEKQYKPHK----NIVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGGSSIGALVTDLFPLRFSNGSVFNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCI---GQNGRGVLFLGDGK--VPSSGVAWTPMLQNSADLKHYILGPAELLYSGKSCGLKDLT----------LIFDSGASYAY 825
            G + +N+ +G P   F    DTGSDL W QC+ PCT C   P   + P      + +PC +  C  L     P     N++C Y   YGDG ++ G + T+ F   F   SV N+   FGCG  + N G     + AG++G+G G +S+ SQL           +C+   G +    L LG     VP  G   T ++ +S +  +Y +    +   G + G+   T          +I DSG +  Y
Sbjct:   94 GEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCE-PCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQDL-----PSETCNNNECQYTYGYGDGSTTQGYMATETF--TFETSSVPNI--AFGCG--EDNQG-FGQGNGAGLIGMGWGPLSLPSQLGV-----GQFSYCMTSYGSSSPSTLALGSAASGVP-EGSPSTTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTY 322          
BLAST of CX671589 vs. ExPASy Swiss-Prot
Match: ASPL1_ARATH (Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.875e-14
Identity = 77/247 (31.17%), Postives = 105/247 (42.51%), Query Frame = 1
Query:  157 LTVGKPPKLFDFDFDTGSDLTWVQCD----APCTGC-----TKPPEKQYKPHKN----IVPCSNPRCAALHWPNPPRCKHPNDQCDYEIEYGDGG-SSIGALVTDLFPL------RFSNGSV-FNVPLTFGCGYNQHNPGPLSPPDTAGVLGLGRGRISIVSQLREYGLIRNVIGHCIGQNGRGVLFLGDGKVPSSGVAWTPMLQ-NSADLKHYILGPAELLYSGKSCGLK--DLTLIFDSGASYAY 825
            + +G P   F    DTGS+L W+ C+    AP T             +Y P  +    +  CS+  C      +   C+ P +QC Y + Y  G  SS G LV D+  L      R  NGS      +  GCG  Q     L      G++GLG   IS+ S L + GL+RN    C  +   G ++ GD  +  S    TP LQ ++     YI+G  E    G SC LK    T   DSG S+ Y
Sbjct:  104 IDIGTPSVSFLVALDTGSNLLWIPCNCVQCAPLTSTYYSSLATKDLNEYNPSSSSTSKVFLCSHKLC-----DSASDCESPKEQCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGDY-LDGVAPDGLMGLGPAEISVPSFLSKAGLMRNSFSLCFDEEDSGRIYFGD--MGPSIQQSTPFLQLDNNKYSGYIVG-VEACCIGNSC-LKQTSFTTFIDSGQSFTY 340          
The following BLAST results are available for this feature:
BLAST of CX671589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ASP1_ORYSI2.406e-5345.02Aspartic proteinase Asp1 OS=Oryza sativa subsp. in... [more]
ASP1_ORYSJ5.547e-5043.03Aspartic proteinase Asp1 OS=Oryza sativa subsp. ja... [more]
NEP1_NEPGR2.513e-1831.45Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
ASPL2_ARATH9.550e-1829.88Aspartic proteinase-like protein 2 OS=Arabidopsis ... [more]
NEP2_NEPGR1.629e-1729.44Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
ASPL1_ARATH2.875e-1431.17Aspartic proteinase-like protein 1 OS=Arabidopsis ... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12A04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A04-B8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671589 ID=CX671589; Name=CX671589; organism=Citrus sinensis; type=EST; length=833bp
ATGTCTGCAAATTTTCCAGGCACTTTCTCTTATACCAAACAAATCCCAGC
AAAGTTAAACTCATTCCAACTACCACAGCCCAAAAGTGGTGCTGCCTCCT
CTGTTTTCCTCCGTGCATTGGGAAGTATTTATCCTCTTGGTTATTTTGCT
GTGAACCTTACCGTAGGGAAGCCACCAAAGCTTTTTGACTTCGACTTTGA
CACGGGCAGCGATCTCACTTGGGTTCAATGCGATGCTCCTTGTACTGGTT
GCACCAAGCCTCCCGAGAAGCAATACAAGCCCCACAAGAACATTGTGCCT
TGTTCTAACCCTCGATGCGCCGCCCTTCACTGGCCGAATCCCCCCCGTTG
CAAACACCCAAATGATCAGTGTGACTATGAAATCGAGTATGGCGATGGTG
GATCATCTATTGGTGCGCTGGTGACTGATTTGTTTCCCTTGCGGTTCAGC
AATGGCTCTGTTTTTAATGTCCCATTGACTTTTGGTTGTGGATATAATCA
GCACAATCCCGGGCCACTTTCTCCTCCGGACACAGCTGGAGTTCTGGGGC
TTGGCAGAGGCAGAATAAGCATAGTGTCACAGCTGCGAGAATACGGGCTA
ATAAGAAATGTGATAGGCCACTGCATAGGCCAAAACGGACGCGGGGTTTT
GTTCCTGGGAGATGGTAAAGTCCCTTCTTCAGGGGTTGCCTGGACACCGA
TGCTGCAAAATTCCGCGGATCTTAAACACTACATACTGGGACCAGCTGAG
CTTTTATATTCTGGCAAGTCTTGTGGTCTAAAAGACCTTACACTCATTTT
CGACAGCGGTGCCTCCTATGCTTATTTCACAAG
back to top