FC871769

Overview
NameFC871769
Unique NameFC871769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length275
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6564 contig Csv1_Contig6564:2..276. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871769 vs. ExPASy Swiss-Prot
Match: MDARP_ARATH (Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3)

HSP 1 Score: 45.8246 bits (107), Expect = 2.649e-11
Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 3 
Query:   30 FIEQKGKTIEIGNFDPKIATFWIDSG 107
            F +  G+T+E+GNFDPKIATFWI+SG
Sbjct:  416 FGDNVGETVEVGNFDPKIATFWIESG 441

HSP 2 Score: 41.5874 bits (96), Expect = 2.649e-11
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 2 
Query:  206 AGKLKGVLVERGSPEEFQLLPTL 274
            +G+LKGVLVE GSPEEFQLLP L
Sbjct:  440 SGRLKGVLVESGSPEEFQLLPKL 462
The following BLAST results are available for this feature:
BLAST of FC871769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MDARP_ARATH2.649e-1169.23Monodehydroascorbate reductase, chloroplastic OS=A... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK1CH03FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1CH03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871769 ID=FC871769; Name=FC871769; organism=Citrus sinensis; type=EST; length=275bp
AAAATTTGAAAAGATATTTACTTGAAAAATTTATTGAACAGAAAGGAAAG
ACAATTGAAATTGGAAATTTTGATCCTAAAATTGCCACTTTCTGGATAGA
TTCAGGGAGTCAGATTATAGCTCTTTACTTGCTTTCGCTCTTTTACTTCA
TCTTGCTTTGTCCTGTTTCTAGTAAAACAGATGGTTAATTCATTGTTGCT
GCCCCGCAGGTAAATTGAAAGGAGTCCTTGTAGAACGTGGGAGTCCTGAG
GAATTCCAACTCCTCCCTACTCTTG
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