CX671548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: SDE3_ARATH (Probable RNA helicase SDE3 OS=Arabidopsis thaliana GN=SDE3 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.797e-24 Identity = 63/184 (34.24%), Postives = 101/184 (54.89%), Query Frame = -2 Query: 127 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSLK----KKIPKSDMFRANAAFREVDGVPVDILPLCLYEGGECFQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNLANENTTVILTGAPNNRTSWVRSDIARKNGLRVSHFERLHATKTYSNFNPMFIT 666 EA++++Y R+LVCAP N D ++ L +I +++FR NAA R + + +I+ C ++ F+ P L+ L R++++ ST+ S+ L+ EG+ GHF+HI L +A A+EPE MIA++NL T V+L G P + S A GL S+ ERL Y + ++T Sbjct: 433 EAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDE-LIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVT 615
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: MOV10_BOVIN (Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21 Identity = 64/192 (33.33%), Postives = 100/192 (52.08%), Query Frame = -2 Query: 127 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSLKKKIPKSDMFRANAAFREVDGVPVDILPLCLYEGGEC-FQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNLA------NENTTVILTGAPNNRTSWVRSDIARKNGLRVSHFERLHA-----TKTYSNFNPMFIT 666 EA+ ++ K K IL CAP N D+L + L+ +P S ++R A R++ VP DI P C ++ + F PS ++L +RV+ +T ++ RL + P HF+HIF+ +A A EPE+++A+ L N ++L G P +R + +K+GL S ERL K +NP FIT Sbjct: 536 EAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSS-IYRLLAPSRDIHLVPEDIKPCCNWDAKKGDFVFPSKKKLQEYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHAMEPESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTFNALYKKGPDGYNPQFIT 726
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: MOV10_HUMAN (Putative helicase MOV-10 OS=Homo sapiens GN=MOV10 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 63/193 (32.64%), Postives = 101/193 (52.33%), Query Frame = -2 Query: 127 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSLKKKIPKSDMFRANAAFREVDGVPVDILPLCLYEG--GECFQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNLANENTT------VILTGAPNNRTSWVRSDIARKNGLRVSHFERLHA-----TKTYSNFNPMFIT 666 EA+ ++ K K IL CAP N D+L + L+ +P S ++R A R++ VP DI P C ++ GE + P+ ++L +RV+ +T ++ RL + P HF+HIF+ +A EPE+++A+ L T ++L G P +RS + +K+GL S ERL K ++P FIT Sbjct: 536 EAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSS-IYRLLAPSRDIRMVPEDIKPCCNWDAKKGE-YVFPAKKKLQEYRVLITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFIT 726
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: MOV10_CHICK (Putative helicase MOV-10 OS=Gallus gallus GN=MOV10 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20 Identity = 60/194 (30.93%), Postives = 97/194 (50.00%), Query Frame = -2 Query: 127 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSLKKKIPKSDMFRANAAFREVDGVPVDILPLCLYEGGE-CFQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNL-------ANEN-TTVILTGAPNNRTSWVRSDIARKNGLRVSHFERLHA-----TKTYSNFNPMFIT 666 EA+ +++ RIL CAP N D+L + L I ++R A+ VP D+ P C ++ E C+ PS + L +R++ +T ++ RL + P G+FSH+F+ + A EPE+++A+ L N N ++L G P RS +A ++GL S ERL K+ +NP F+T Sbjct: 528 EAIKQVWSCFKDARILACAPSNSAADLLCQRLLTNIAPRYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSKKLLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDTNPNGGQLVLAGDPQQLGPVPRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVT 721
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: MOV10_MOUSE (Putative helicase MOV-10 OS=Mus musculus GN=Mov10 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20 Identity = 64/193 (33.16%), Postives = 102/193 (52.85%), Query Frame = -2 Query: 127 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSLKKKIPKSDMFRANAAFREVDGVPVDILPLCLYEG--GECFQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNL------ANENTTVILTGAPNNRTSWVRSDIARKNGLRVSHFERLHA-----TKTYSNFNPMFIT 666 EA+ ++ K K IL CAP N D+L + L+ +P S ++R A R++ VP DI C ++ GE + P+ + L ++RV+ +T ++ RL + P HF+HIF+ +A EPE+++A+ L N ++L G P +RS +A K+GL S ERL A K + ++P FIT Sbjct: 537 EAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSS-IYRLLAPSRDIRMVPEDIKTCCNWDAKKGE-YVYPAKKHLQQYRVLITTLITASRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALKHGLGYSLLERLLAYNSLYKKGPNGYDPQFIT 727
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: M10L1_MOUSE (Putative helicase Mov10l1 OS=Mus musculus GN=Mov10l1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18 Identity = 63/192 (32.81%), Postives = 98/192 (51.04%), Query Frame = -2 Query: 127 EAVLEIYKRSSKCRILVCAPINRTGD-VLMRSLKKKIPK-SDMFRANAAFREVDGVPVDILPLCLYEGGECFQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNLANENTTVILTGAPNNRTSWVRSDIARKNGLRVSHFERLHATKTY----------SNFNPMFIT 666 EAVL+++ RILVCAP N D V +R + K+PK + M R NA R + + I P C GE + RFR+I +T +S+ + G+ G+F+H+F+ +A A+EPE +I L +++ N ++L G P ++S +A GL VS ERL + Y +NP+ +T Sbjct: 784 EAVLQVHYALPDSRILVCAPSNSAADLVCLRLHESKVPKPAAMVRVNATCRFEETIIDAIKPYC--RDGE-----DIWRASRFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVT 968
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: MV10A_DANRE (Putative helicase mov-10-A OS=Danio rerio GN=mov10a PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.779e-17 Identity = 57/168 (33.93%), Postives = 87/168 (51.79%), Query Frame = -2 Query: 172 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSL--KKKIPKSDMFRANAAFREVDGVPVDILPLCLYEGGECFQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNLANENT-TVILTGAPNNRTSWVRSDIARKNGLRVSHFERL 666 EA+ ++ K + RIL CAP N D L L + + +++R A+ R +P +L GE P ++LM ++++ T ++ RL + G P GHFSHIF+ +A A EPE +I++ L N T ++L G P +RS A K GL +S ERL Sbjct: 562 EAIKQVEKNTGGARILACAPSNSAADQLGEKLITSQHVDARNIYRIYASSRNPKEIP-KVLENNSNVEGENIIFPCKEDLMPYKIVVCTLVTAGRLVSGGFPVGHFSHIFVDEAGHAVEPEIVISVAGLLNAETGQLVLAGDPKQLGPILRSPFAIKYGLGLSLLERL 728
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: M10L1_HUMAN (Putative helicase Mov10l1 OS=Homo sapiens GN=MOV10L1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.779e-17 Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = -2 Query: 127 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSL--KKKIPKSDMFRANAAFREVDGVPVDILPLCLYEGGECFQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNLANENTTVILTGAPNNRTSWVRSDIARKNGLRVSHFERLHATKTYSN----------FNPMFIT 666 EAVL+++ RILVCAP N D++ L K + + M R NA R + V + P C GE + + RFR+I +T +SS + G+ GHF+H+F+ +A A+EPE +I L +++ + ++L G P ++S +A GL VS ERL + Y NP+ +T Sbjct: 782 EAVLQVHFALPDSRILVCAPSNSAADLVCLRLHESKVLQPATMVRVNATCRFEEIVIDAVKPYC--RDGE-----DIWKASRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVT 966
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: ARMI_DROME (Probable RNA helicase armi OS=Drosophila melanogaster GN=armi PE=2 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 60/208 (28.85%), Postives = 92/208 (44.23%), Query Frame = -2 Query: 127 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSL--KKKIPKSDMFRANAAFR-EVDGVPVDILPLCLYEG----GECFQLPSLQE-----------LMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNLANENTTVILTGAPNNRTSWVRSDIARKNGLRVSHFERLHATKTY----------SNFNPMFIT 666 E +L++ + RILV P N + D++ + L K + + D R + + E D +P +I+ C G C + E + R+ ST T+ G PAGHF+H+ +A TEPETM+ + L + + V+L+G P S V S IA K G +S ERL Y S +NP+ +T Sbjct: 821 ETLLQLVRNLPGARILVGTPSNSSADLVTKRLIDSKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVGSCEDKMMVTESGLKLRCQAKFIGTHRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVLT 1028
BLAST of CX671548 vs. ExPASy Swiss-Prot
Match: MV10B_DANRE (Putative helicase mov-10-B OS=Danio rerio GN=mov10b PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13 Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = -2 Query: 172 EAVLEIYKRSSKCRILVCAPINRTGDVLMRSL--KKKIPKSDMFRANAAFREVDGVPVDILPLCLYEGGECFQLPSLQELMRFRVIFSTFTSSFRLHNEGIPAGHFSHIFLVDASSATEPETMIALTNLAN-ENTTVILTGAPNNRTSWVRSDIARKNGLRVSHFERL 666 EA+ ++ K IL CAP N D L L + + ++R A+ R +P + C + E P ++LM ++++ T ++ RL G HF+H F+ +A A E ET+I++ L N E ++L G P +RS +A +GL VS ERL Sbjct: 567 EAIKQVEKNIPDAYILACAPSNSAADQLCEKLITSEHVDAHKIYRLYASSRNQKDIPKILKDNCNVD-EEMIDFPCKEDLMSYKILICTLVTAGRLVTGGFSEDHFTHNFVDEAGHAVESETIISVAGLLNAEKGQLVLAGDPKQLGPILRSPLAINHGLDVSLLERL 733 The following BLAST results are available for this feature:
BLAST of CX671548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671548 ID=CX671548; Name=CX671548; organism=Citrus sinensis; type=EST; length=709bpback to top |