CX671544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671544 vs. ExPASy Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.967e-13 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = -2 Query: 682 NAALKQPEGTYRALASGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 897 NAA K P+ YR L QVV IHPSS LF +PE +V++EL+ T +Y+R +T ID WL E AP ++ + + Sbjct: 1138 NAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1209
BLAST of CX671544 vs. ExPASy Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.967e-13 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = -2 Query: 682 NAALKQPEGTYRALASGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 897 NAA K P+ YR L QVV IHPSS LF +PE +V++EL+ T +Y+R +T ID WL E AP ++ + + Sbjct: 1114 NAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSD 1185
BLAST of CX671544 vs. ExPASy Swiss-Prot
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = -2 Query: 694 NAALKQPEGTYRALASGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 897 NAA + P+ YR L GQ V IHPSS F+ +PE +V++EL+ T +Y+R +T ID WL E AP ++ Sbjct: 1089 NAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFF 1156
BLAST of CX671544 vs. ExPASy Swiss-Prot
Match: DHX33_HUMAN (Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = -2 Query: 694 QPEGTYRALASGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 882 QP+GTY + Q V IHPSSVLF KP C+V+ EL+ TN Y+R++ ID WL E AP+Y+ Sbjct: 636 QPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYF 698
BLAST of CX671544 vs. ExPASy Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = -2 Query: 676 NAALKQPEGTYRALASGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN*N 897 NA+ K P Y+ L GQ V IHPSS LF P+ ++++EL+ T +Y+R + ID WL ELAP+++ + N Sbjct: 1057 NASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPN 1130
BLAST of CX671544 vs. ExPASy Swiss-Prot
Match: DHX8_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.962e-11 Identity = 29/72 (40.28%), Postives = 48/72 (66.67%), Query Frame = -2 Query: 682 NAALKQPEGTYRALASGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYYTMQN 897 + A K P+ YR L Q V IHPSS LF+ +P+ +++++L+ T +Y+R +T ID WL ELAP+++ + + Sbjct: 1064 HGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSD 1135
BLAST of CX671544 vs. ExPASy Swiss-Prot
Match: DHX33_MOUSE (Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.371e-11 Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = -2 Query: 694 NAALKQPEGTYRALASGQVVQIHPSSVLFRAKPECIVFNELIQTNHKYIRNITRIDYLWLTELAPQYY 897 N A Q +GTY + Q V IHPSSVLF KP C+V+ L+ TN Y+R++ +D WL E AP Y+ Sbjct: 622 NTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYF 689 The following BLAST results are available for this feature:
BLAST of CX671544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671544 ID=CX671544; Name=CX671544; organism=Citrus sinensis; type=EST; length=898bpback to top |