CX671457

Overview
NameCX671457
Unique NameCX671457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2449 contig Csv1_Contig2449:90..823. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLNA_VIGAC (Glutamine synthetase nodule isozyme OS=Vigna aconitifolia PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 8.583e-102
Identity = 176/205 (85.85%), Postives = 183/205 (89.27%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            T+KIIAEYIWIGGSG+D+RSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVI+YPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRH AAKIFSH DVVAEEPWYGIEQEYTLLQKDV WPL                   ADKA+GRDIVD+HYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGD+LWVARYI
Sbjct:   16 TEKIIAEYIWIGGSGLDLRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHNAAKIFSHPDVVAEEPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCGAGADKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLNA1_MEDSA (Glutamine synthetase cytosolic isozyme OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.619e-100
Identity = 172/205 (83.90%), Postives = 183/205 (89.27%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            T+KIIAEYIWIGGSG+D+RSKARTLPGPV+DPS+LPKWNYDGSSTGQAPGEDSEVI+YPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSH DVVAE PWYGIEQEYTLLQKD+ WPL                   ADKA+GRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGP+VGISAGD++WVARYI
Sbjct:   16 TEKIIAEYIWIGGSGLDLRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGEDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHPDVVAEVPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGAGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLN11_ARATH (Glutamine synthetase cytosolic isozyme 1-1 OS=Arabidopsis thaliana GN=GLN1-1 PE=1 SV=2)

HSP 1 Score: 363.614 bits (932), Expect = 6.151e-100
Identity = 171/205 (83.41%), Postives = 182/205 (88.78%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            TDKIIAEYIW+GGSGMDMRSKARTLPGPV+DPS+LPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAK+FS+ DV AE PWYGIEQEYTLLQKDVKWP+                   ADK++GRD+VDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISA D++WVARYI
Sbjct:   16 TDKIIAEYIWVGGSGMDMRSKARTLPGPVTDPSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKVFSNPDVAAEVPWYGIEQEYTLLQKDVKWPVGWPIGGYPGPQGPYYCGIGADKSFGRDVVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAADEIWVARYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLNA1_LOTJA (Glutamine synthetase cytosolic isozyme OS=Lotus japonicus GN=GLN1 PE=2 SV=2)

HSP 1 Score: 360.918 bits (925), Expect = 3.987e-99
Identity = 169/205 (82.44%), Postives = 183/205 (89.27%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            TDKIIAEYIWIGGSG+DMRSKARTLPGPVSDPS+LPKWNYDGSSTGQAPGEDSEVILYPQAIF+DPFRRG+NILV+CDAYTPAGEPIPTNKRHAAAK+FSH DVVAE PWYGIEQEYTLLQK+V WP+                   ADKA+GRDIVD+HYKACLYAG+NISGINGEVMPGQWEFQVGP+VGISAGD++WVARYI
Sbjct:   16 TDKIIAEYIWIGGSGLDMRSKARTLPGPVSDPSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRRGSNILVICDAYTPAGEPIPTNKRHAAAKVFSHPDVVAEVPWYGIEQEYTLLQKEVNWPVGWPIGGFPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPSVGISAGDEVWVARYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLNA_NICPL (Glutamine synthetase OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.515e-98
Identity = 171/205 (83.41%), Postives = 182/205 (88.78%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            T+KIIAEYIWIGGSGMD+RSKARTL GPV+DP+KLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFS+ DVVAEEPWYGIEQEYTLLQ+D+ WPL                   ADKA+GRDIVDSHYKA LYAGINISGINGEVMPGQWEFQVGP+VGISAGD++WVARYI
Sbjct:   16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPAKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSNPDVVAEEPWYGIEQEYTLLQRDINWPLGWPIGGFPGPQGPYYCGTGADKAFGRDIVDSHYKAYLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWVARYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLNA2_VITVI (Glutamine synthetase cytosolic isozyme 2 OS=Vitis vinifera GN=GS1-2 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 4.408e-98
Identity = 171/205 (83.41%), Postives = 178/205 (86.83%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            T+KIIAEYIWIGGSGMD+RSKARTL GPVSDP KLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCD YTPAGEPIPTNKRH AAKIFSH +V+AEE WYGIEQEYTLLQ  VKWP+                   ADKA+GRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGD+LWVARYI
Sbjct:   16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVSDPHKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRHNAAKIFSHPEVLAEETWYGIEQEYTLLQNSVKWPIGWPVGGYPGPQGPYYCGIGADKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLNA_LUPLU (Glutamine synthetase nodule isozyme OS=Lupinus luteus PE=3 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.283e-97
Identity = 167/205 (81.46%), Postives = 181/205 (88.29%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            T+KIIAEYIW+GGSG+D+RSKARTL GPV+DPSKLPKWNYDGSSTGQAPG+DSEVIL+PQAIFKDPFRRGNNILVMCD YTPAGEPIPTNKRHAAAKIFSH DVVAEEPW+GIEQEYTLLQKD+ WP+                   A+KA+GRDIVDSHYKACLYAGINISGIN EVMPGQWEFQVGP+VGISAGD+LWVARYI
Sbjct:   16 TEKIIAEYIWVGGSGVDLRSKARTLSGPVNDPSKLPKWNYDGSSTGQAPGKDSEVILWPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRHAAAKIFSHPDVVAEEPWFGIEQEYTLLQKDIHWPIGWPLGGFPGPQGPYYCGTGAEKAFGRDIVDSHYKACLYAGINISGINAEVMPGQWEFQVGPSVGISAGDELWVARYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLN11_ORYSJ (Glutamine synthetase cytosolic isozyme 1-1 OS=Oryza sativa subsp. japonica GN=GLN1-1 PE=1 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.675e-97
Identity = 168/205 (81.95%), Postives = 179/205 (87.32%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            T+KIIAEYIWIGGSGMD+RSKARTL GPV+DPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR+GNNILVMCD YTPAGEPIPTNKRH AAKIFS  +V +EEPWYGIEQEYTLLQKD+ WPL                   ADK++GRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGP+VGISAGDQ+WVARYI
Sbjct:   16 TEKIIAEYIWIGGSGMDLRSKARTLSGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRKGNNILVMCDCYTPAGEPIPTNKRHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVARYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLNA1_VITVI (Glutamine synthetase cytosolic isozyme 1 OS=Vitis vinifera GN=GS1-1 PE=2 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.188e-97
Identity = 166/205 (80.98%), Postives = 178/205 (86.83%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            T+K+I EYIW+GGSGMD+RSKARTL GPVSDP+KLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCD YTPAGEPIPTNKR  AAKIFSH DV AE PWYGIEQEYTLLQK+VKWP+                   ADKAWGRDIVD+HYKACLYAGINISGINGEVMPGQWE+QVGP+VGISAGD+LWV+RYI
Sbjct:   16 TEKVIVEYIWVGGSGMDLRSKARTLSGPVSDPAKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDTYTPAGEPIPTNKRCNAAKIFSHPDVAAEVPWYGIEQEYTLLQKEVKWPIGWPVGGFPGPQGPYYCGIGADKAWGRDIVDAHYKACLYAGINISGINGEVMPGQWEYQVGPSVGISAGDELWVSRYI 220
[Close]
BLAST of CX671457 vs. ExPASy Swiss-Prot
Match: GLNA1_PHAVU (Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.188e-97
Identity = 166/205 (80.98%), Postives = 182/205 (88.78%), Query Frame = 2 
Query:  119 TDKIIAEYIWIGGSGMDMRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYI 733
            T+K+IAEYIWIGGSG+D+RSKARTLPGPV +PS+LPKWNYDGSSTGQAPG+DSEVI+YPQAIFKDPFRRGNNILV+CDAYTPAGEPIPTNKRH AAKIFS+ DVVAEEPWYGIEQEYTLLQK+V WP+                   ADKA+GRDIVD+HYKAC+YAGINISGINGEVMPGQWEFQVGPAVGISAGD+LWVARYI
Sbjct:   16 TEKVIAEYIWIGGSGLDLRSKARTLPGPVKNPSELPKWNYDGSSTGQAPGQDSEVIIYPQAIFKDPFRRGNNILVICDAYTPAGEPIPTNKRHNAAKIFSNPDVVAEEPWYGIEQEYTLLQKEVNWPVGWPVGGFPGPQGPYYCGVGADKAFGRDIVDAHYKACVYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYI 220
The following BLAST results are available for this feature:
BLAST of CX671457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_VIGAC8.583e-10285.85Glutamine synthetase nodule isozyme OS=Vigna aconi... [more]
GLNA1_MEDSA1.619e-10083.90Glutamine synthetase cytosolic isozyme OS=Medicago... [more]
GLN11_ARATH6.151e-10083.41Glutamine synthetase cytosolic isozyme 1-1 OS=Arab... [more]
GLNA1_LOTJA3.987e-9982.44Glutamine synthetase cytosolic isozyme OS=Lotus ja... [more]
GLNA_NICPL1.515e-9883.41Glutamine synthetase OS=Nicotiana plumbaginifolia ... [more]
GLNA2_VITVI4.408e-9883.41Glutamine synthetase cytosolic isozyme 2 OS=Vitis ... [more]
GLNA_LUPLU1.283e-9781.46Glutamine synthetase nodule isozyme OS=Lupinus lut... [more]
GLN11_ORYSJ1.675e-9781.95Glutamine synthetase cytosolic isozyme 1-1 OS=Oryz... [more]
GLNA1_VITVI2.188e-9780.98Glutamine synthetase cytosolic isozyme 1 OS=Vitis ... [more]
GLNA1_PHAVU2.188e-9780.98Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11B08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11B08-D15-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671457 ID=CX671457; Name=CX671457; organism=Citrus sinensis; type=EST; length=734bp
AACATCCCTTCAATCACAGTAATCTCATTACCAGTTTCTTTGTTGTGTTA
AGAGACTAAAGAGTCTTCGAAACATGTCTCTGCTCTCAGATCTCCTTAAC
CTTAACCTCTCAGAATCCACTGACAAGATCATCGCTGAGTACATATGGAT
CGGTGGATCTGGCATGGACATGAGGAGCAAAGCAAGGACTCTTCCCGGTC
CCGTTAGTGATCCTTCCAAGCTGCCTAAGTGGAATTATGATGGTTCCAGC
ACAGGCCAAGCACCTGGAGAAGATAGTGAAGTGATCCTCTATCCTCAAGC
TATTTTCAAGGATCCATTCAGGAGAGGCAACAATATTCTTGTTATGTGTG
ATGCTTACACTCCTGCGGGGGAACCAATTCCAACAAACAAAAGACATGCA
GCTGCCAAGATTTTCAGCCATTCTGACGTTGTGGCTGAAGAACCATGGTA
TGGTATTGAGCAGGAATACACCTTACTGCAGAAGGATGTTAAATGGCCTC
TTGGCTGGCCCATCGGTGGTTATCCTGGGCCTCAGGGACCATACTACTGT
GGTGTTGGTGCTGACAAAGCTTGGGGGCGCGACATTGTAGACTCCCATTA
CAAGGCCTGTCTATATGCAGGAATCAACATCAGTGGCATCAATGGAGAAG
TCATGCCGGGGCAGTGGGAGTTCCAAGTTGGTCCCGCTGTTGGAATTTCT
GCTGGAGATCAGTTGTGGGTTGCCCGCTATATTT
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