CX671405

Overview
NameCX671405
Unique NameCX671405
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671405 vs. ExPASy Swiss-Prot
Match: M2K2_ARATH (Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana GN=MKK2 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 3.376e-48
Identity = 98/151 (64.90%), Postives = 115/151 (76.16%), Query Frame = 2
Query:  116 MKKGGLNPNVKLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPLIKPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMD 568
            MKKGG + N  LKL++P + E S TKFLT+SGTF DGDL VNKDGVRI+SQ E E    IKP+D+QL+L D+D             QLVQHKWTGQFFALKVIQ+N++E+ R+ IAQELKINQSSQCP +V  YQSFY NGAIS+ILEYMD
Sbjct:    1 MKKGGFSNN--LKLAIPVAGEQSITKFLTQSGTFKDGDLRVNKDGVRIISQLEPEVLSPIKPADDQLSLSDLDMVKVIGKGSSGVVQLVQHKWTGQFFALKVIQLNIDEAIRKAIAQELKINQSSQCPNLVTSYQSFYDNGAISLILEYMD 149          
BLAST of CX671405 vs. ExPASy Swiss-Prot
Match: M2K1_ARATH (Mitogen-activated protein kinase kinase 1 OS=Arabidopsis thaliana GN=MKK1 PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 1.984e-40
Identity = 88/151 (58.28%), Postives = 107/151 (70.86%), Query Frame = 2
Query:  116 MKKGGLNPNVKLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPLIKPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMD 568
            M +G L PN    + LP  E+ S +KFLT+SGTF DGDL VNKDG++ VS +E  APP I+P DNQL+L D++             QLV+HK T QFFALKVIQ+N EES  R I+QEL+IN SSQCPY+V CYQSFY NG +SIILE+MD
Sbjct:    1 MNRGSLCPN---PICLPPLEQ-SISKFLTQSGTFKDGDLRVNKDGIQTVSLSEPGAPPPIEPLDNQLSLADLEVIKVIGKGSSGNVQLVKHKLTQQFFALKVIQLNTEESTCRAISQELRINLSSQCPYLVSCYQSFYHNGLVSIILEFMD 147          
BLAST of CX671405 vs. ExPASy Swiss-Prot
Match: M2K6_ARATH (Mitogen-activated protein kinase kinase 6 OS=Arabidopsis thaliana GN=MKK6 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.471e-35
Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 2
Query:  146 KLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPLIKPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQ-SSQCPYVVVCYQSFYSNGAISIILEYMD 568
            +LKLS+P+ +E+  + FLT SGTF DGD L+N+ G+R+ S  +       K  D ++  ED++T            QLV+HKW G+FFA+KVIQMN++E  R+QI QELKINQ SSQCP+VVVCY SFY NGA S++LEYMD
Sbjct:   10 QLKLSVPA-QESPISSFLTASGTFHDGDFLLNQKGLRLTSDEKQSRQSDSKELDFEITAEDLETVKVIGKGSGGVVQLVRHKWVGKFFAMKVIQMNIQEEIRKQIVQELKINQASSQCPHVVVCYHSFYHNGAFSLVLEYMD 150          
BLAST of CX671405 vs. ExPASy Swiss-Prot
Match: M2K1_ORYSJ (Mitogen-activated protein kinase kinase 1 OS=Oryza sativa subsp. japonica GN=MEK1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.392e-32
Identity = 68/149 (45.64%), Postives = 102/149 (68.46%), Query Frame = 2
Query:  128 GLNPNVKLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPL--IKPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMD 568
            G  P+ +LKLS+P+ +E    KFLT SGTF DG+L +N+ G++++S+   + P    +K  D QL+++D++             QLV+HKW G  +ALK IQMN++E+ R+QI QELKINQ++Q  ++V+C+QSFY NG I ++LEYMD
Sbjct:    3 GKKPHKELKLSVPA-QETPVDKFLTASGTFKDGELRLNQRGLQLISEETADEPQSTNLKVEDVQLSMDDLEMIQVIGKGSGGIVQLVRHKWVGTLYALKGIQMNIQEAVRKQIVQELKINQATQNAHIVLCHQSFYHNGVIYLVLEYMD 150          
The following BLAST results are available for this feature:
BLAST of CX671405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
M2K2_ARATH3.376e-4864.90Mitogen-activated protein kinase kinase 2 OS=Arabi... [more]
M2K1_ARATH1.984e-4058.28Mitogen-activated protein kinase kinase 1 OS=Arabi... [more]
M2K6_ARATH1.471e-3552.82Mitogen-activated protein kinase kinase 6 OS=Arabi... [more]
M2K1_ORYSJ3.392e-3245.64Mitogen-activated protein kinase kinase 1 OS=Oryza... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_10H04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10H04-O8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671405 ID=CX671405; Name=CX671405; organism=Citrus sinensis; type=EST; length=568bp
GCTATGCAAGAAAAGTTTCGCATTCTAAAACCCTAGAGACTTGATTTTTC
ATCATCAAAGACTCTGCAACGACGACTTCGCTTCAGAAGAATCATAATAG
ACACAAGAGCCGATCATGAAGAAGGGAGGCTTAAACCCTAACGTGAAGCT
CAAGCTCTCTCTCCCTTCTTCTGAGGAAGCCTCTTTCACCAAATTTCTGA
CCAAGAGCGGTACGTTCATGGACGGTGATCTGCTCGTTAACAAAGACGGA
GTTCGGATTGTCTCCCAGACTGAAACTGAAGCTCCACCGCTGATTAAGCC
ATCTGACAACCAGTTGAATTTGGAAGATATAGACACAATTAAAGTTGTTG
GAAAGGGAAGTGGTGGAATTGTGCAATTGGTGCAACACAAATGGACTGGC
CAGTTTTTTGCTTTAAAGGTTATTCAAATGAATGTTGAGGAGTCTGCACG
AAGGCAGATTGCTCAGGAGTTGAAAATTAATCAATCATCTCAATGTCCGT
ATGTTGTCGTTTGTTATCAATCTTTCTACAGTAATGGTGCCATTTCAATT
ATTTTGGAGTACATGGAT
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