CX671398

Overview
NameCX671398
Unique NameCX671398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA_TOBAC (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Nicotiana tabacum GN=GSA PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.376e-57
Identity = 106/132 (80.30%), Postives = 112/132 (84.85%), Query Frame = -3
Query:    1 YFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 396
            YFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL+ PGTYEYL+KITGELTQGI+DAGKK GHA+CGGYI GMFGF F EGPV NF DAKKS+T KF RFYRG
Sbjct:  306 YFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQGPGTYEYLDKITGELTQGILDAGKKTGHAMCGGYIRGMFGFLFAEGPVNNFSDAKKSDTEKFGRFYRG 437          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA2_ARATH (Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic OS=Arabidopsis thaliana GN=GSA2 PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 1.798e-57
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = -3
Query:    1 YFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 396
            YFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL +PGTYEYL+KIT ELT GI++AGKK GHA+CGGYISGMFGFFFTEGPVY+F DAKKS+T KF +F+RG
Sbjct:  300 YFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLSQPGTYEYLDKITKELTNGILEAGKKTGHAMCGGYISGMFGFFFTEGPVYDFSDAKKSDTEKFGKFFRG 431          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA_BRANA (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Brassica napus GN=GSA PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 2.348e-57
Identity = 104/132 (78.79%), Postives = 113/132 (85.61%), Query Frame = -3
Query:    1 YFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 396
            YFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK+PGTYEYL+KIT ELT GI++AGKK GH +CGGYISGMFGFFF EGPVYNF DAKKS+T KF +F+RG
Sbjct:  301 YFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKQPGTYEYLDKITKELTNGILEAGKKTGHPMCGGYISGMFGFFFAEGPVYNFADAKKSDTEKFGKFFRG 432          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA_SOYBN (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Glycine max GN=GSA1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.165e-56
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = -3
Query:    1 YFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 396
            YFG+TPD           LPVGAYGGRRDIME VAPAGPMYQAGTLSGNPLAMTAGI TL+R+KEPGTYEYL+KITGEL +GII+AGK+AGHAICGG+I GMFGFFFTEGPVYNF DAKKS+T KFARF+ G
Sbjct:  294 YFGITPDITTLGKIIGGGLPVGAYGGRRDIMEKVAPAGPMYQAGTLSGNPLAMTAGIETLQRIKEPGTYEYLDKITGELVEGIIEAGKRAGHAICGGHIRGMFGFFFTEGPVYNFADAKKSDTAKFARFFWG 425          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA1_ARATH (Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic OS=Arabidopsis thaliana GN=GSA1 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.987e-56
Identity = 103/132 (78.03%), Postives = 112/132 (84.85%), Query Frame = -3
Query:    1 YFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 396
            YFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK+ GTYEYL+KIT ELT GI++AGKK GH +CGGYISGMFGFFF EGPVYNF D+KKS+T KF RF+RG
Sbjct:  302 YFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKQAGTYEYLDKITKELTNGILEAGKKTGHPMCGGYISGMFGFFFAEGPVYNFADSKKSDTEKFGRFFRG 433          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA_SOLLC (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 1.288e-55
Identity = 102/132 (77.27%), Postives = 111/132 (84.09%), Query Frame = -3
Query:    1 YFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 396
            YFG+TPD           LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL+  GTYE+L+KIT ELTQGI+DAGKK GHA+CGG I GMFGFFF +GP+YNF DAKKS+T KF RFYRG
Sbjct:  309 YFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQGQGTYEHLDKITAELTQGILDAGKKTGHAMCGGSIRGMFGFFFADGPIYNFSDAKKSDTEKFGRFYRG 440          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA_ORYSJ (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Oryza sativa subsp. japonica GN=GSA PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 4.895e-55
Identity = 99/132 (75.00%), Postives = 111/132 (84.09%), Query Frame = -3
Query:    1 YFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 396
            YFG+TPD           LPVGAYGGR+DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL EPGTY+YL+KITG+L +G++DAG K GH +CGG+I GMFGFFFT GPV+NF DAKKS+T KF RFYRG
Sbjct:  306 YFGITPDVSTLGKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLMEPGTYDYLDKITGDLVRGVLDAGAKTGHEMCGGHIRGMFGFFFTAGPVHNFGDAKKSDTAKFGRFYRG 437          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA_HORVU (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Hordeum vulgare GN=GSA PE=1 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 1.860e-54
Identity = 98/132 (74.24%), Postives = 110/132 (83.33%), Query Frame = -3
Query:    1 YFGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 396
            YFG+TPD           LPVGAYGGR+DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL EPGTYEYL+K+TGEL +GI+D G K GH +CGG+I GMFGFFF  GPV+NF+DAKKS+T KF RF+RG
Sbjct:  297 YFGITPDVTTLGKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLMEPGTYEYLDKVTGELVRGILDVGAKTGHEMCGGHIRGMFGFFFAGGPVHNFDDAKKSDTAKFGRFHRG 428          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA_SYNE7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus elongatus (strain PCC 7942) GN=hemL PE=1 SV=3)

HSP 1 Score: 187.193 bits (474), Expect = 2.202e-47
Identity = 87/131 (66.41%), Postives = 107/131 (81.68%), Query Frame = -3
Query:    1 FGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 393
            FGVTPD           LPVGAYGG+R+IM++VAPAGPMYQAGTLSGNPLAMTAGI TL+ L++PGTYEYL++IT  L+ G++   ++ GHA CGG +SGMFGFFFTEGPV+N+EDAKKS+  KF+RF+RG
Sbjct:  262 FGVTPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRG 392          
BLAST of CX671398 vs. ExPASy Swiss-Prot
Match: GSA_SYNP6 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemL PE=1 SV=4)

HSP 1 Score: 184.882 bits (468), Expect = 1.093e-46
Identity = 86/131 (65.65%), Postives = 106/131 (80.92%), Query Frame = -3
Query:    1 FGVTPDXXXXXXXXXXXLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 393
            FGVTPD           LPVGAYGG+R+IM++VAPAGPMYQAGTLSGNPLAMTAGI TL+ L++P TYEYL++IT  L+ G++   ++ GHA CGG +SGMFGFFFTEGPV+N+EDAKKS+  KF+RF+RG
Sbjct:  262 FGVTPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPATYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRG 392          
The following BLAST results are available for this feature:
BLAST of CX671398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_TOBAC1.376e-5780.30Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA2_ARATH1.798e-5778.79Glutamate-1-semialdehyde 2,1-aminomutase 2, chloro... [more]
GSA_BRANA2.348e-5778.79Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_SOYBN1.165e-5678.79Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA1_ARATH1.987e-5678.03Glutamate-1-semialdehyde 2,1-aminomutase 1, chloro... [more]
GSA_SOLLC1.288e-5577.27Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_ORYSJ4.895e-5575.00Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_HORVU1.860e-5474.24Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_SYNE72.202e-4766.41Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNP61.093e-4665.65Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10H01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10H01-O2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671398 ID=CX671398; Name=CX671398; organism=Citrus sinensis; type=EST; length=398bp
TCCCCTGTAAAATCTTGCAAACTTTGTGGTTTCACTCTTCTTTGCATCCT
CAAAGTTGTAAACAGGCCCTTCGGTAAAGAAAAATCCAAACATCCCACTT
ATATACCCTCCACAAATGGCATGCCCAGCTTTCTTTCCAGCATCAATGAT
GCCTTGAGTAAGTTCACCTGTGATCTTATTCAAGTATTCATAAGTTCCTG
GCTCCTTCAATCGTTTAAGGGTGTGTATCCCAGCGGTCATTGCCAATGGA
TTCCCACTTAAGGTCCCAGCCTGGTACATTGGGCCTGCCGGTGCCACCAT
CTCCATGATATCCCTTCTTCCTCCATAAGCACCAACTGGCAGCCCACCTC
CAATGATTTTACCAAGAGTTGTCAAATCAGGAGTTACCCCAAAATATT
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