FC871755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.589e-32 Identity = 66/84 (78.57%), Postives = 74/84 (88.10%), Query Frame = 2 Query: 410 FGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 FG TSLYVGDL+ NVTDSQL+D F QMG VV+VRVCRDL TRRSLGYGYVNF+N Q+AARA++ LN+ PL GKPIRVMYSHRDP Sbjct: 33 FGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDP 116
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.122e-23 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP Sbjct: 51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDP 132
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.122e-23 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP Sbjct: 47 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDP 128
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.122e-23 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP Sbjct: 48 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDP 129
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.122e-23 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP Sbjct: 53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDP 134
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.122e-23 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP Sbjct: 51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDP 132
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.122e-23 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP Sbjct: 50 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDP 131
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 2.542e-22 Identity = 45/82 (54.88%), Postives = 67/82 (81.71%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ L++LF+ +GQV S+RVCRD TRRSLGY YVN++++++ +ALE LN+T + GKP R+M+S RDP Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWSQRDP 128
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.320e-22 Identity = 46/82 (56.10%), Postives = 65/82 (79.27%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ L++LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + G+P R+M+S RDP Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDP 135
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 5.663e-22 Identity = 46/82 (56.10%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN+++ RAL+ LN+T + GKP R+M+S RDP Sbjct: 41 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDP 122 The following BLAST results are available for this feature:
BLAST of FC871755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871755 ID=FC871755; Name=FC871755; organism=Citrus sinensis; type=EST; length=669bpback to top |