EG358265

Overview
NameEG358265
Unique NameEG358265
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length181
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:772..952. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.868e-21
Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            TSP K+ EA++ LGADSFLVSRDQD+MQAA+GTMDGIIDTVSA HPL+PLIGLL S GKL
Sbjct:  213 TSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKL 272          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.028e-20
Identity = 45/60 (75.00%), Postives = 56/60 (93.33%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            TSP+KK EA+ RLGADSF+VSR+ ++MQ+AMGT+DGIIDTVSA HPL+PL+GLLKSQGK+
Sbjct:  216 TSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKM 275          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.655e-18
Identity = 43/60 (71.67%), Postives = 54/60 (90.00%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            TSP+K++EAI++LGADSFLVS+D ++M+AAMGTMD IIDT+SA H LMPL+GLLK  GKL
Sbjct:  214 TSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKL 273          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.655e-18
Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            TS  K+ EA+ RLGAD+FLVSRD  +M+ AMGTMDGIIDTVSA HPL+PL+GLLK++GKL
Sbjct:  211 TSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKL 270          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.234e-18
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            TS SKK EA+E+LGAD FLVS D D+MQAA GT+ GIIDTVSA+HP++PL+GLLK  GKL
Sbjct:  192 TSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKL 251          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.892e-17
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            TS  K+ EAI RLGAD+FLVSRD  +++ AMGTMDGIIDTVSA H L+PL+GLLK +GKL
Sbjct:  211 TSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKL 270          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.176e-16
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 1
Query:    7 PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            P+KK EAI+ LGADSFLVSRD D+M+A   T+DGIIDTVSA H ++PLIGLLKS GKL
Sbjct:  219 PTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKL 276          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.421e-16
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            ++  K  +A++ LGAD FLVS D+D+M+AAMGTMDGIIDTVSA H + PLIGLLKS GKL
Sbjct:  216 STTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKL 275          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.620e-16
Identity = 40/60 (66.67%), Postives = 52/60 (86.67%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            TSP K++EA+ERLGAD+FL+S + ++M+AA GTMDGIIDTVSAVH L PLI LL++ G+L
Sbjct:  216 TSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQL 275          
BLAST of EG358265 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 9.952e-16
Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 1
Query:    1 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 180
            +SP K+ EA+ERLGAD+F+VS++ DEM AA GTMDGII+TVSA  P+ PL+GLLK  GK+
Sbjct:  208 SSPGKRQEALERLGADAFVVSKNADEMNAATGTMDGIINTVSANIPIAPLLGLLKPNGKM 267          
The following BLAST results are available for this feature:
BLAST of EG358265 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
MTDH_FRAAN7.868e-2180.00Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR1.028e-2075.00Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_MEDSA3.655e-1871.67Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH7_ARATH3.655e-1871.67Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_PETCR6.234e-1871.67Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH8_ARATH6.892e-1770.00Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH3_STYHU1.176e-1672.41Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CADH6_ARATH3.421e-1666.67Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH9_ORYSJ7.620e-1666.67Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH5_ORYSJ9.952e-1665.00Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]

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Properties
Property NameValue
Genbank description10f4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010f4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358265 ID=EG358265; Name=EG358265; organism=Citrus sinensis; type=EST; length=181bp
ACCTCCCCTAGCAAGAAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTC
CTTTTTGGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAA
TGGATGGTATTATCGATACAGTATCTGCAGTTCACCCTCTAATGCCGTTG
ATTGGACTGTTGAAATCTCAAGGAAAGCTTG
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