CX671365

Overview
NameCX671365
Unique NameCX671365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6956 contig Csv1_Contig6956:1246..1822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX671365 vs. ExPASy Swiss-Prot
Match: DHAR1_ARATH (Glutathione S-transferase DHAR1, mitochondrial OS=Arabidopsis thaliana GN=DHAR1 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.185e-48
Identity = 91/127 (71.65%), Postives = 107/127 (84.25%), Query Frame = -3 
Query:  193 EPSLTNPPEFASLGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYMKKLFALESFQKTKAEKQYVIAGWAPKVN 573
            +P L  P EFAS+GS IF +F  FLKSKD NDG+E ALL EL+AL+ HLK+H GPFIAGE+V+AVDLSLAPKLYHLQVAL HFK W+VPES  HVH YMK LF+L+SF+KTK E++YVI+GWAPKVN
Sbjct:   86 DPPLKTPAEFASVGSNIFGTFGTFLKSKDSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYVISGWAPKVN 212
The following BLAST results are available for this feature:
BLAST of CX671365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHAR1_ARATH1.185e-4871.65Glutathione S-transferase DHAR1, mitochondrial OS=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_10F07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10F07-K14-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671365 ID=CX671365; Name=CX671365; organism=Citrus sinensis; type=EST; length=578bp
TTTTTTAAAGAGTAAATACCATTCAACCAGGAGGTTTCATTATAACAAAT
AGCAAATATCATTGTAGCTACCTTTATTGGATGATACAAACCCCCAGTGA
ACATTCTAATTATGCTCCAAGTCTCACACATACATTACTCGCATTTCATT
AGCTAGATTTCAAACACCGCATAGCTTAGAACTAGTTCATGCATTGACCT
TCGGCGCCCATCCTGCAATCACGTATTGCTTTTCAGCCTTAGTCTTCTGA
AAGGATTCCAGGGCAAAAAGCTTCTTCATGTACCCATGGACATGAGCCAA
GCTCTCAGGGACAGTCCACTGCTTGAAATGTTCAAGAGCTACCTGAAGGT
GGTACAGCTTTGGTGCCAAGCTCAAATCTACAGCAGTGACCTTCTCTCCA
GCAATGAATGGACCTCCATGGGTCTTAAGATGCTCATCCAATGCTTTCAA
TTCCTCCAGCAAAGCTTGCTCTGTCCCATCATTTGGGTCCTTGCTCTTCA
AGAAATTGACAAAAGATGGGAATATCTTTGATCCAAGAGAGGCAAATTCA
GGAGGATTGGTAAGAGAAGGCTCAGCCT
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