FC871752

Overview
NameFC871752
Unique NameFC871752
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length735
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6561 contig Csv1_Contig6561:578..1312. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871752 vs. ExPASy Swiss-Prot
Match: Y2734_ARATH (Uncharacterized protein At2g17340 OS=Arabidopsis thaliana GN=At2g17340 PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.630e-74
Identity = 138/158 (87.34%), Postives = 150/158 (94.94%), Query Frame = 1
Query:    7 KAWKKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQLMGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKYNEVSS 480
            K+WKKAVIFVDNSGADIILGILPFARELLRRG QV+LAAN+LPSIND+T  EL EI+S+LKDE GQL+GVDTSKLLIANSGNDLPVIDL+ VSQELAYL+SDADLVI+EGMGRGIETNLYAQFKCDSLKIGMVKH EVA+FLGGRLYDCVFK+NEV S
Sbjct:  210 KSWKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANELPSINDITCTELTEILSQLKDENGQLLGVDTSKLLIANSGNDLPVIDLSRVSQELAYLSSDADLVIVEGMGRGIETNLYAQFKCDSLKIGMVKHLEVAEFLGGRLYDCVFKFNEVQS 367          
BLAST of FC871752 vs. ExPASy Swiss-Prot
Match: PANK2_ARATH (Pantothenate kinase 2 OS=Arabidopsis thaliana GN=At4g32180 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.653e-34
Identity = 83/178 (46.63%), Postives = 114/178 (64.04%), Query Frame = 1
Query:   16 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMS---------KLKDEKGQLMGVD--------------TSKLLIANSGNDLPVIDLTAVSQELAYLASDADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQ-FLGGRLYDCVFKYNEVS 477
            K+A++FVDNSGAD+ILG+LP ARE LRRGT+V+L AN LP++NDVT  EL +I++         +   E G L+ VD              ++ L++  +G   P IDL  VS ELA  A DADLV+LEGMGR + TN  AQF+C++LK+ MVK+  +A+  + G +YDCV +Y   S
Sbjct:  693 KRALLFVDNSGADVILGMLPLAREFLRRGTEVVLVANSLPALNDVTAMELPDIVAGAAKHCDILRRAAEMGGLL-VDAMVNPGDGSKKDSTSAPLMVVENGCGSPCIDLRQVSSELAAAAKDADLVVLEGMGRALHTNFNAQFQCEALKLAMVKNQRLAEKLIKGNIYDCVCRYEPPS 869          
BLAST of FC871752 vs. ExPASy Swiss-Prot
Match: PANK4_HUMAN (Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.116e-31
Identity = 68/153 (44.44%), Postives = 103/153 (67.32%), Query Frame = 1
Query:   16 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 465
            K A+IF DNSG DIILG+ PF RELL RGT+VILA N  P++NDVT+ E + +  ++      +   +   +LL+  +G+  P +DL+ + + LA L  +  ADLV++EGMGR + TN +A  +C+SLK+ ++K+  +A+ LGGRL+  +FKY
Sbjct:  616 KCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALQEERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKY 768          
BLAST of FC871752 vs. ExPASy Swiss-Prot
Match: PANK4_PONAB (Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.043e-30
Identity = 68/153 (44.44%), Postives = 103/153 (67.32%), Query Frame = 1
Query:   16 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 465
            K A+IF DNSG DIILG+ PF RELL RGT+VILA N  P++NDVT+ E + +  ++      +   +   +LL+  +G+  P +DL+ + + LA L  +  ADLV++EGMGR + TN +A  +C+SLK+ ++K+  +A+ LGGRL+  +FKY
Sbjct:  616 KCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHSESLIVAERIAGMDPVVHSALREERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALRCESLKLAVIKNAWLAERLGGRLFSVIFKY 768          
BLAST of FC871752 vs. ExPASy Swiss-Prot
Match: PANK4_MACFA (Pantothenate kinase 4 OS=Macaca fascicularis GN=PANK4 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.178e-30
Identity = 68/153 (44.44%), Postives = 102/153 (66.67%), Query Frame = 1
Query:   16 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 465
            K A+IF DNSG DIILG+ PF RELL RGT+VILA N  P++NDVT+ E + +  ++      +   +   +LL+  +G+  P +DL+ + + LA L  +  ADLV++EGMGR + TN +A   C+SLK+ ++K+  +A+ LGGRL+  +FKY
Sbjct:  616 KCALIFADNSGIDIILGVFPFVRELLLRGTEVILACNSGPALNDVTHGESLIVAERIAGMDPVVHSALREERLLLVQTGSSSPCLDLSRLDKGLAALVRERGADLVVIEGMGRAVHTNYHAALCCESLKLAVIKNAWLAERLGGRLFSVIFKY 768          
BLAST of FC871752 vs. ExPASy Swiss-Prot
Match: PANK4_RAT (Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank4 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.762e-30
Identity = 68/153 (44.44%), Postives = 102/153 (66.67%), Query Frame = 1
Query:   16 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDLTAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 465
            K A+IF DNSG DIILG+ PF RELL RG +VILA N  P++NDVTY E + +  ++      +   +   +LL+  +G+  P +DL+ + + LA L  +  ADLV++EGMGR + TN +A  +C+SLK+ +VK+  +A+ LGG+L+  +FKY
Sbjct:  616 KCALIFADNSGIDIILGVFPFVRELLCRGIEVILACNSGPALNDVTYSESLIVAERIAAMDPIICTALREDRLLLVQTGSSPPCLDLSRLDKGLAVLVRERGADLVVIEGMGRAVHTNYHALLRCESLKLAVVKNAWLAERLGGQLFSVIFKY 768          
BLAST of FC871752 vs. ExPASy Swiss-Prot
Match: PANK4_MOUSE (Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.245e-24
Identity = 70/200 (35.00%), Postives = 103/200 (51.50%), Query Frame = 1
Query:   16 KKAVIFVDNSGADIILGILPFARELLRRGTQVILAANDLPSINDVTYPELIEIMSKLKDEKGQL-MGVDTSKLLIANSGNDLPVIDL-----------------------------------------------TAVSQELAYLASD--ADLVILEGMGRGIETNLYAQFKCDSLKIGMVKHPEVAQFLGGRLYDCVFKY 465
            K A+IF DNSG DIILG+ PF RELL RGT+VILA N  P++NDVTY E + +  ++      +   +   +LL+  +G+  P +DL                                               + + + LA L  +  ADLV++EGMGR I TN +A  +C+SLK+ +VK+  +A+ LGG+L+  +FKY
Sbjct:  616 KCALIFADNSGIDIILGVFPFVRELLFRGTEVILACNSGPALNDVTYSESLIVAERIAAMDPIICTALREDRLLLVQTGSSSPCLDLSLCTSRTTTCMVLPFAMWVLWTKLKSLVEKCLSPLSILLACSVLSAKSRLDKGLAVLVRERGADLVVIEGMGRAIHTNYHALLRCESLKLAVVKNAWLAERLGGQLFSVIFKY 815          
The following BLAST results are available for this feature:
BLAST of FC871752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
Y2734_ARATH7.630e-7487.34Uncharacterized protein At2g17340 OS=Arabidopsis t... [more]
PANK2_ARATH2.653e-3446.63Pantothenate kinase 2 OS=Arabidopsis thaliana GN=A... [more]
PANK4_HUMAN6.116e-3144.44Pantothenate kinase 4 OS=Homo sapiens GN=PANK4 PE=... [more]
PANK4_PONAB1.043e-3044.44Pantothenate kinase 4 OS=Pongo abelii GN=PANK4 PE=... [more]
PANK4_MACFA5.178e-3044.44Pantothenate kinase 4 OS=Macaca fascicularis GN=PA... [more]
PANK4_RAT6.762e-3044.44Pantothenate kinase 4 OS=Rattus norvegicus GN=Pank... [more]
PANK4_MOUSE4.245e-2435.00Pantothenate kinase 4 OS=Mus musculus GN=Pank4 PE=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK1CG02FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1CG02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871752 ID=FC871752; Name=FC871752; organism=Citrus sinensis; type=EST; length=735bp
AGCAAGAAAGCTTGGAAGAAGGCTGTCATTTTTGTTGATAATTCTGGAGC
GGATATAATTTTAGGTATCCTACCGTTTGCAAGGGAATTACTCCGACGTG
GAACTCAGGTTATTTTGGCTGCTAATGACTTACCTTCAATCAATGATGTA
ACCTACCCTGAACTGATTGAAATCATGTCAAAGTTGAAGGATGAAAAGGG
GCAGCTCATGGGCGTTGATACTTCAAAGCTTTTGATTGCCAATTCTGGCA
ATGATTTGCCAGTTATTGATCTTACAGCAGTATCACAAGAGCTTGCCTAC
CTAGCGAGTGATGCAGACCTAGTTATCTTAGAAGGAATGGGTCGTGGAAT
TGAAACAAATCTGTACGCTCAATTCAAATGTGATTCCTTGAAGATTGGGA
TGGTCAAACATCCCGAGGTTGCCCAGTTTCTAGGAGGACGGCTCTATGAT
TGTGTCTTTAAATACAATGAAGTTTCAAGTTAAAGTTGATTCTTTGCCTG
TCCCCCTAACCCTATTCGTCCTGTGTCGATCATTCAGTGCACATAGAATA
TTAGAGCATAAAAACTTAAGCATATGAATGTCAAAATTTCACCCTTATAG
GCAATAATGGAAACTGAAAATCCGAAGACTTGCACCCGAATGGTTTTTCC
ATACTTGTGATGTCGGGTGGATTGTATTTTCCTGTCGGGTGGATTGTATT
TTCCTGTTTATGAAGTTCGGCTTCATAATTACTGT
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