CX671332

Overview
NameCX671332
Unique NameCX671332
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length431
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671332 vs. ExPASy Swiss-Prot
Match: GNB1L_DICDI (Guanine nucleotide-binding protein subunit beta-like protein 1 homolog OS=Dictyostelium discoideum GN=gnb1l PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.593e-13
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = -1 
Query:    6 SKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 281
            ++S   + +  GYE+G +L+WD+RN  IPL + K+H EP+L  ++  +   GISG  D  I+ +N+++ +    I K   L   GIS   IR
Sbjct:  202 NQSNDQIRLCTGYENGELLIWDLRNTSIPLVSSKLHNEPILSFALSNNSTKGISGSGDTNIIEFNINYESKQFNITKTHKLNNGGISEIKIR 293
The following BLAST results are available for this feature:
BLAST of CX671332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GNB1L_DICDI8.593e-1335.87Guanine nucleotide-binding protein subunit beta-li... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_10D11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10D11-G22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671332 ID=CX671332; Name=CX671332; organism=Citrus sinensis; type=EST; length=431bp
TCAGGTCGAATTGAGGTGCCTGATATGCCAGGTCGTTCCAAATTTATTTC
CTTCTTGATCACACACGAACCCGTGGAATGATCTAAATTATACAGTACAA
TCTTTTGGTCTGCACCTCCTGATATGCCTCCATTGCATGACTCATCAATG
CTCAGACATAGTACTGGCTCTAAATGAACCTTCATGGCAGTAAGTGGAAT
CCCTGGATTCCGTATATCCCATACAAGAATGGAACCATCCTCATATCCTG
CCAAGACATTTACGAATCCTTGTGATTTAGAAGGTAAATATGCTTGAACC
GCCATGCACATCCCTGAGAAGAAAGCAACTTATTATATATCTAACTTCCG
GATCATTGAAGCAAGAATACTTTTTCTAAAATCATATTTTATGTCACATC
ATGTCATTCTGGAACACTTGCAATATTTTAA
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