CX671330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671330 vs. ExPASy Swiss-Prot
Match: FDL1_ARATH (F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.456e-13 Identity = 70/247 (28.34%), Postives = 109/247 (44.13%), Query Frame = 2 Query: 47 NIDKNIIRKLTLMEAARTCVLSSRWRYLWTFTTALDFDGIREILPRTKRYFREYKFVRWVNKVLVLHRGSNVSQFRVSFYLSSSLEGVITNWIYKALAKTVQNFELDFQYNSGHHYTFPQEIYNSLK---------------GVRGLSSIKSLRSICLSAVNVTGEILEFFIHNCPLLDELCVKDSIDLVSLKVVGSSVRLNSLDIQYCSFMKDIEISTPNLFSFKYYGPKIELHIENVPQLVELSV 742 +I +NI+ +L++ +A RT VLSS+WRY W+ T L FD + + P R E VR++ VL+LH+G + +F++S I W+ ++ EL + G + P ++N LK +G S +KSL L + V E++E I CPLL+ L + LV + IS PNL G ++ +EN P+LV +SV Sbjct: 14 SIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDE-KCVSPSNDRCVVETNLVRFITGVLLLHQGP-IHKFQLSTSFKQCRPD-IDQWLLFLSRNGIK--ELVLKLGEG-EFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYLKSLN---LHQILVAPEVIESLISGCPLLEFLSLSYFDSLV------------------------LSISAPNLMYLYLDGEFKDIFLENTPKLVAISV 227
BLAST of CX671330 vs. ExPASy Swiss-Prot
Match: FDL41_ARATH (Putative F-box/FBD/LRR-repeat protein At5g62970 OS=Arabidopsis thaliana GN=At5g62970 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.073e-12 Identity = 68/279 (24.37%), Postives = 120/279 (43.01%), Query Frame = 2 Query: 44 DNIDKNIIRKLTLMEAARTCVLSSRWRYLWTFTTALDFD---------GIREILPRTKRYFRE---------YKFVRWVNKVLVLHRGSNVSQFRVSFYLSSSLEGVITNWIYKALAKTVQNFELDFQYNSGHHYTFPQEIY------------NSLKGVRGLSSIKSLRSICLSAVNV-TGEILEFFIHNCPLLDELCVK----DSIDLVSLKVVGSSVRLNSLDIQYCSFMKDIEISTPNLFSFKY--YGPKIELHIENVPQLVELSVRADHTVEDM 769 D + I+ L A T VLS +W++LW L++D R LP+ K E ++ ++ K L LH + R+ F+ I W+ A+++ Q +DF H+ P+ +Y N L V + S+ SL+ + L V GE L+ + NC +L++L V+ D++ + + ++ S + L+ +YC++ + I TP+L FK IEN+P+L E ++ A H + + Sbjct: 10 DELLVKILSFLPFKFAITTSVLSKQWKFLWMRVPKLEYDEDSMYSFEYSFRYFLPKAKEVDSETYSIVSESGHRMRSFIEKNLPLHSSPVIESLRLKFFTEVFQPEDIKLWVEIAVSRCAQELSVDFFPKEKHNALLPRNLYTCKSLVTLKLRNNILVDVPHVFSLPSLKILHLERVTYGDGESLQRLLSNCSVLEDLVVELDTGDNVRKLDV-IIPSLLSLSFGMSRYCAY-EGYRIDTPSLKYFKLTDLSKTFSGLIENMPKLEEANITARHNFKKL 286
BLAST of CX671330 vs. ExPASy Swiss-Prot
Match: FBL39_ARATH (F-box/LRR-repeat protein At2g42730 OS=Arabidopsis thaliana GN=At2g42730 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.708e-12 Identity = 72/265 (27.17%), Postives = 123/265 (46.42%), Query Frame = 2 Query: 44 DNIDKNIIRKLTLMEAARTCVLSSRWRYLWTFTTALDFDGIREILPRTKRYFREY--KFVRWVNKVLVLHRGSNVSQFRVSFYL---SSSLEGVITNWIYKALAKTVQNFELDFQYNSGHHYTFPQEIYNS-----LKGVRGLS-------SIKSLRSICLSAVNVTG--EILEFFIHNCPLLDELCVKDSIDLVSLKVVGSSVRLNSLDIQYCSFMKDIEISTPNLFSFKYYG------PKIELHIENVPQLVE--LSVRADHT 757 D + I+ ++ EA T VLS RW+ ++ + LD D R+ +P+TK+ E ++ +V+K+L RGS++ + + ++ + I +WI L V + ++ F G P I+ S L+ RG + S+ LR++CL +VN G ++ I CP+L+EL V++ V SS L L I++ I + PNL +K+ G P ++L L+E L++R D T Sbjct: 12 DEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDD-RQSVPKTKQNRIEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDV-FITLKGKSPPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGHNVVGTLISRCPVLEELVVEER-RCVDWTCSVSSPSLKRLHIRFDRKFTSISLDAPNLIYYKHSGYVLGKYPNVKL-----DSLIEARLNLRMDET 268 The following BLAST results are available for this feature:
BLAST of CX671330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671330 ID=CX671330; Name=CX671330; organism=Citrus sinensis; type=EST; length=836bpback to top |