CX671322

Overview
NameCX671322
Unique NameCX671322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MG_ARATH (DNA-3-methyladenine glycosylase OS=Arabidopsis thaliana GN=MAG PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.542e-88
Identity = 153/186 (82.26%), Postives = 173/186 (93.01%), Query Frame = -3
Query:  211 ALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKP-EKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLMP 765
            ALDLAPRLLGKF+RRD+V+L+ITEVEAYRPNDSACHGRFG+T RTAPVFGPGG AYVYLCYGLH MLN+VADKEGVGAAVLIRSC+PVSG++TIQ+RR   T+KPVLL GPGKVGQALG+STEWS+HPLY PGGLE+LDG +  EK+++GPRVGI+YALPEHVNALWRFA+A TPWISAPKNTL P
Sbjct:   68 ALDLAPRLLGKFMRRDNVVLRITEVEAYRPNDSACHGRFGVTPRTAPVFGPGGHAYVYLCYGLHMMLNIVADKEGVGAAVLIRSCSPVSGMETIQERRGLKTDKPVLLNGPGKVGQALGLSTEWSHHPLYSPGGLELLDGGEDVEKVMVGPRVGIDYALPEHVNALWRFAVADTPWISAPKNTLKP 253          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_NITOC (Putative 3-methyladenine DNA glycosylase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_0079 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.571e-51
Identity = 105/187 (56.15%), Postives = 131/187 (70.05%), Query Frame = -3
Query:  208 ALDLAPRLLGKFLRRDDVLLQITEVEAYR-PNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAPKNTLMPQ 765
            AL++A  LLG  L R+ V+L+ITEVEAYR P D+A HGR G T R  P++GP G  Y+YLCYG+H +LN+V  +EG  AAVLIR+C PV+GL  IQ+RR     KP LLTGPGKVG ALG+   W++HPLY PGGLE+  G     +L GPRVGI YA PEH +A WR AI   PW+S  ++ L P+
Sbjct:   14 ALEVAADLLGASLCREQVVLRITEVEAYRWPEDTANHGRHGQTLRNEPLWGPPGRVYLYLCYGIHHLLNLVTGEEGQAAAVLIRACEPVAGLDLIQRRRRGKI-KPGLLTGPGKVGAALGLDLSWNHHPLYEPGGLEVRRGTPVAALLAGPRVGIAYAHPEHRDAPWRLAIPDNPWVSC-RSQLQPR 198          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_RHOP2 (Putative 3-methyladenine DNA glycosylase OS=Rhodopseudomonas palustris (strain HaA2) GN=RPB_2889 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.862e-26
Identity = 74/177 (41.81%), Postives = 101/177 (57.06%), Query Frame = -3
Query:  229 DLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAP 759
            ++AP L+G  L  + V   I EVEAY   D A H   G TAR A +FGP G AYVY  YG+H  +NVV + EG  +AVLIR+  P  G++ ++ RR  L +   L +GPGK+ QALGIS   +  PL  P         +P+ I+ GPR+GI  A     +  WRF + G+ ++S P
Sbjct:   29 EVAPELIGATLLVEGVGGVIVEVEAYHHTDPAAHSYGGQTARNAVMFGPPGFAYVYRSYGIHWCVNVVCEAEGSASAVLIRALQPTHGVEAMRARRG-LDDARSLCSGPGKLAQALGISIAHNGLPLDAPPFAIHRRIGEPD-IVTGPRIGITKA----ADYPWRFGLKGSRFVSVP 199          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_RUBXD (Putative 3-methyladenine DNA glycosylase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=Rxyl_1309 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.882e-26
Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = -3
Query:  250 ITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPE-KILIGPRVGIEYALPEHVNALWRFAIAG 702
            I E EAYRP D ACH   G + R   +FG  GLAYVYL YG+H +LN V + EGVG+AVLIRS AP+ G+  +++RR +  +   L  GPG++ ++LG+      H L +  GL I  GP P  +I+   R+G+           WR+ + G
Sbjct:   21 IVETEAYRPEDPACHAYRGPSMRNRTLFGGPGLAYVYLSYGMHRLLNAVCEGEGVGSAVLIRSLAPLEGVPLMRRRRGRAAD---LCNGPGRLAESLGVGLSLDGHDLTLGEGLYIAPGPPPRGEIVSTTRIGVS----RGAELPWRYLVLG 165          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_UNCMA (Putative 3-methyladenine DNA glycosylase OS=Uncultured methanogenic archaeon RC-I GN=UNCMA_17850 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.376e-26
Identity = 72/181 (39.78%), Postives = 103/181 (56.91%), Query Frame = -3
Query:  235 LDLAPRLLGKFLRRD----DVLLQITEVEAY-RPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWIS 762
            L++A  LLGK L R      V L+I E EAY   ND ACH   G+TAR   +FG  G AYVYL YG++  LN+V +K+G  AAVLIR+  P+ G + +   R +  +   + +GPGK+  A+ I+   +   +   G L + DGP  +KI+  PR+G++YA  E     WRF    +P +S
Sbjct:   14 LEVARDLLGKTLVRQLPAGRVALRIVETEAYIGENDKACHASKGMTARNRVMFGQPGHAYVYLIYGMYNCLNLVTEKDGYPAAVLIRAGEPIEGEEIMSSLRPKARKHHEIASGPGKLCGAMSITRALNGADVCASGELYVEDGPAVKKIVACPRIGVDYA-GEDALRPWRFYDKNSPCVS 193          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_CORGB (Putative 3-methyladenine DNA glycosylase OS=Corynebacterium glutamicum (strain R) GN=cgR_0192 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.423e-25
Identity = 73/175 (41.71%), Postives = 97/175 (55.43%), Query Frame = -3
Query:  235 LAPRLLGKFLRRDDVLLQITEVEAYRPN-DSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWIS 756
            +AP+LLG  L    V ++ITEVEAY  + D A H   G T R A +FGPGG  YVY+ YG+H   N+V   EG G  VL+R+   VSG    Q RR +      L  GPG  GQALG+    ++  ++ P  L I DG +  +I+ GPR+GI     ++  AL RF I   P +S
Sbjct:   33 VAPQLLGCTLTHGGVGIRITEVEAYLDSTDEAAHTYRGKTPRNAAMFGPGGHMYVYISYGIHRAGNIVCGPEGTGQGVLLRAGEVVSGESIAQNRRGERIPHARLAQGPGNFGQALGLEVSDNHASVFGPSFL-ISDGVETPEIVRGPRIGIS----KNTEALLRFWIPNDPTVS 202          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_NITMU (Putative 3-methyladenine DNA glycosylase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=Nmul_A1264 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25
Identity = 69/179 (38.55%), Postives = 104/179 (58.10%), Query Frame = -3
Query:  229 ALDLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAP 765
            ++D+A  L+G  L  + V  +I E EAY  +D A H   G T R   +FGP   AY+Y  YG+H  LN V    G GA VLIR+  P+ GL  +++RR  L+++ +L +GPG+V +ALGI+ E+S   +  P   ++     P  ++ GPR+GI  A     +  WRF +AG+P++S P
Sbjct:   14 SVDVARSLIGATLLVNGVGGRIVETEAYDHDDPASHSFSGPTRRNQVMFGPPCHAYIYRSYGIHWCLNFVCRPAGHGAGVLIRAIEPLVGLDIMRKRRG-LSDERLLCSGPGRVCEALGITQEYSGMSIDTP-PFQLTPPLDPVPVVTGPRIGISKA----KDVPWRFGLAGSPFLSRP 186          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_CHLP8 (Putative 3-methyladenine DNA glycosylase OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0350 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24
Identity = 72/187 (38.50%), Postives = 104/187 (55.61%), Query Frame = -3
Query:  226 LDLAPRLLGK-FLRRDDVLL----QITEVEAYR-PNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIG--PRVGIEYALPEHVNALWRFAIAGTPWISAPK 762
            L+LA RLLGK F+R +D  +    +I E EAY    D ACH   G+T R   +FGP G  Y+Y  YG H M+N+V+++EG   AVL+R+  P+ G+  +Q+RR    E+  L++GPGK+ QALGI  E     L +     + D P+  + LIG  PR+GI           WR  +  +P +S  +
Sbjct:   14 LELAERLLGKIFVRCEDTGMVTKARIVETEAYLGEGDEACHAWRGMTNRNRAMFGPPGHLYIYFTYGCHYMINIVSEQEGTAGAVLLRAMEPLEGIDRMQERRGTADER-ALMSGPGKLAQALGIGPELYGSSL-LGESCWLEDAPEIPEELIGTSPRIGI----TRSTELPWRKFVTASPHVSTTR 194          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_NITWN (Putative 3-methyladenine DNA glycosylase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=Nwi_1438 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24
Identity = 68/177 (38.42%), Postives = 99/177 (55.93%), Query Frame = -3
Query:  229 DLAPRLLGKFLRRDDVLLQITEVEAYRPNDSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWISAP 759
            D+AP L+G  L  D V   I EVEAY   + A H   G T R   +FGP G AYVY  YG+H  +N V + +G  AAVLIR+  P  G+  +++RR  L E+ +L +GPG++ QALGIS   +  PL  P  + +    +   ++ G R+GI  A     +  WR+ + G+ ++S P
Sbjct:   32 DVAPDLIGATLLVDGVGGIIVEVEAYHHTEPAAHSHRGPTPRNMVMFGPPGFAYVYRSYGIHWCVNFVCEMDGSAAAVLIRALQPTHGIPAMRRRRG-LHEERLLCSGPGRLCQALGISIAHNALPLDAP-PIAVFRRTEKADVVAGVRIGITKA----ADLPWRYGLKGSKFLSKP 202          
BLAST of CX671322 vs. ExPASy Swiss-Prot
Match: 3MGH_CORGL (Putative 3-methyladenine DNA glycosylase OS=Corynebacterium glutamicum GN=mag PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24
Identity = 72/175 (41.14%), Postives = 96/175 (54.86%), Query Frame = -3
Query:  235 LAPRLLGKFLRRDDVLLQITEVEAYRPN-DSACHGRFGITARTAPVFGPGGLAYVYLCYGLHTMLNVVADKEGVGAAVLIRSCAPVSGLKTIQQRRAQLTEKPVLLTGPGKVGQALGISTEWSNHPLYMPGGLEILDGPKPEKILIGPRVGIEYALPEHVNALWRFAIAGTPWIS 756
            +AP+LLG  L    V ++ITEVEAY  + D A H   G T R A +FGPGG  YVY+ YG+H   N+V   EG G  VL+R+   VSG    Q RR +      L  GPG  GQALG+    ++  ++ P  L I D  +  +I+ GPR+GI     ++  AL RF I   P +S
Sbjct:   12 VAPQLLGCTLTHGGVGIRITEVEAYLDSTDEAAHTYRGKTPRNAAMFGPGGHMYVYISYGIHRAGNIVCGPEGTGQGVLLRAGEVVSGESIAQSRRGEGIPHARLAQGPGNFGQALGLEISDNHASVFGPSFL-ISDRVETPEIVRGPRIGIS----KNTEALLRFWIPNDPTVS 181          
The following BLAST results are available for this feature:
BLAST of CX671322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
3MG_ARATH1.542e-8882.26DNA-3-methyladenine glycosylase OS=Arabidopsis tha... [more]
3MGH_NITOC2.571e-5156.15Putative 3-methyladenine DNA glycosylase OS=Nitros... [more]
3MGH_RHOP22.862e-2641.81Putative 3-methyladenine DNA glycosylase OS=Rhodop... [more]
3MGH_RUBXD4.882e-2641.45Putative 3-methyladenine DNA glycosylase OS=Rubrob... [more]
3MGH_UNCMA6.376e-2639.78Putative 3-methyladenine DNA glycosylase OS=Uncult... [more]
3MGH_CORGB2.423e-2541.71Putative 3-methyladenine DNA glycosylase OS=Coryne... [more]
3MGH_NITMU9.207e-2538.55Putative 3-methyladenine DNA glycosylase OS=Nitros... [more]
3MGH_CHLP82.679e-2438.50Putative 3-methyladenine DNA glycosylase OS=Chloro... [more]
3MGH_NITWN3.499e-2438.42Putative 3-methyladenine DNA glycosylase OS=Nitrob... [more]
3MGH_CORGL4.570e-2441.14Putative 3-methyladenine DNA glycosylase OS=Coryne... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10D06-G12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671322 ID=CX671322; Name=CX671322; organism=Citrus sinensis; type=EST; length=767bp
CGGCAGGAAGCCAAAAACGACAGTAGTATAGCAGGAAGAGTACTGTTGTT
TTATATACTACAGTAATAAAAAGTGTTCAAATAGCAGTGCACTTTTCATT
TTACAATTTTCTGATAAGCAGGAAACAGGCTGTTCATGTTAGTTCTTCAA
TTCTAACTTCCACCGTTTCCACGTACACGTGCTTGCTGCGAAGAATATAT
AAAATCATTGAGGCATCAGTGTGTTTTTAGGAGCACTTATCCAGGGGGTA
CCGGCAATGGCAAATCTCCACAAGGCATTAACATGCTCAGGTAAAGCATA
TTCAATGCCTACTCGTGGACCAATCAATATCTTCTCAGGCTTGGGACCAT
CTAAGATTTCTAAACCACCAGGCATGTAAAGAGGGTGGTTTGACCATTCT
GTTGAAATTCCCAGTGCTTGACCAACCTTTCCTGGTCCAGTGAGAAGAAC
AGGTTTCTCAGTTAATTGTGCACGACGCTGCTGAATGGTCTTCAGCCCAC
TGACAGGAGCACAAGATCGTATTAGAACTGCAGCCCCAACTCCTTCCTTG
TCAGCTACAACATTAAGCATTGTATGGAGACCATAGCATAGATAGACATA
CGCAAGCCCTCCGGGTCCAAAAACCGGGGCTGTTCTTGCTGTAATTCCAA
ATCTACCATGGCATGCTGAATCATTCGGTCTGTAAGCTTCTACCTCAGTA
ATTTGAAGAAGAACATCATCTCTCCTAAGAAACTTGCCAAGCAAACGAGG
GGCAAGATCAAGAGCAT
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