CX671298

Overview
NameCX671298
Unique NameCX671298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.568e-32
Identity = 63/79 (79.75%), Postives = 74/79 (93.67%), Query Frame = 3
Query:  579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815
            S+WVMMNKLTRRLSK+P+EVR EIEP+F+NSDPV+ EDS+KL KL DSTA++V +GLTP+WSDLDVNQHVNNVKYIGWI
Sbjct:  244 SVWVMMNKLTRRLSKIPEEVRGEIEPFFMNSDPVLAEDSQKLVKLDDSTAEHVCKGLTPKWSDLDVNQHVNNVKYIGWI 322          

HSP 2 Score: 129.798 bits (325), Expect = 1.786e-29
Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 3
Query:    3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 218
            GLL  GFGATP M KKNLIWVVTRMQVVVDRYPTW DVV V+TWVSASGKNGMRRDWL+ N++TGE LTRAT
Sbjct:  172 GLLGEGFGATPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVSNSETGEILTRAT 243          
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.553e-31
Identity = 59/79 (74.68%), Postives = 72/79 (91.14%), Query Frame = 3
Query:  579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815
            S+WVMMN+ TRRLSK+PDEVR EIEP+F++S PV+++D RKLPKL + TAD +R+GLTPRW+DLDVNQHVNNVKYIGWI
Sbjct:  248 SVWVMMNQKTRRLSKIPDEVRNEIEPHFVDSPPVIEDDDRKLPKLDEKTADSIRKGLTPRWNDLDVNQHVNNVKYIGWI 326          

HSP 2 Score: 106.686 bits (265), Expect = 1.620e-22
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 3
Query:    3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 218
            GL + GFG TP M K++LIWVV +MQV+V+RYPTW D V V TWV+ SGKNGMRRDWLI +  TGE LTRA+
Sbjct:  176 GLSNDGFGRTPEMYKRDLIWVVAKMQVMVNRYPTWGDTVEVNTWVAKSGKNGMRRDWLISDCNTGEILTRAS 247          
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.465e-23
Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 3
Query:  579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815
            SL VMMN  TRRLSK+P+EVR EI P F+++  V DE+ +K  KL DSTADY++ GLTPRW+DLD+NQHVNN+KY+ WI
Sbjct:  217 SLSVMMNTRTRRLSKIPEEVRGEIGPAFIDNVAVKDEEIKKPQKLNDSTADYIQGGLTPRWNDLDINQHVNNIKYVDWI 295          

HSP 2 Score: 94.7449 bits (234), Expect = 6.369e-19
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 3
Query:    3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 218
            G+L  GFG T  M+K++LIWVV R  V V+RYP W D V VE WV ASG NG R D+L+R+ KTGE LTR T
Sbjct:  145 GILGDGFGTTLEMSKRDLIWVVKRTHVAVERYPAWGDTVEVECWVGASGNNGRRHDFLVRDCKTGEILTRCT 216          
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.499e-23
Identity = 50/79 (63.29%), Postives = 64/79 (81.01%), Query Frame = 3
Query:  579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815
            SL V+MN  TRRLS +PDEVR EI P F+++  V D++ +KL KL DSTADY++ GLTPRW+DLDVNQHVNN+KY+ W+
Sbjct:  217 SLSVLMNTRTRRLSTIPDEVRGEIGPAFIDNVAVKDDEIKKLQKLNDSTADYIQGGLTPRWNDLDVNQHVNNLKYVAWV 295          

HSP 2 Score: 99.3673 bits (246), Expect = 2.586e-20
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 3
Query:    3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 218
            G+L  GFG T  M+K++L+WVV R  V V+RYPTW D V VE W+ ASG NGMRRD+L+R+ KTGE LTR T
Sbjct:  145 GILGDGFGTTLEMSKRDLMWVVRRTHVAVERYPTWGDTVEVECWIGASGNNGMRRDFLVRDCKTGEILTRCT 216          
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.504e-15
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 3
Query:    3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT-RW 224
            G    GF  TP M K +LIWV  RM + + RYP W+DVV +ETW  + G+ G RRDW+I++  T E + RAT +W
Sbjct:  120 GFSTDGFATTPTMRKLHLIWVTARMHIEIYRYPAWSDVVEIETWCQSEGRIGTRRDWIIKDFATDEVIGRATSKW 194          

HSP 2 Score: 72.0182 bits (175), Expect = 4.421e-12
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3
Query:  579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVV--DEDSRKLPKLG--DSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815
            S WVMMN+ TRRL K+ D+VR E   +   +  +   +E+++ L K+   +  A + R GL+PR +DLD+NQHVNNV YIGW+
Sbjct:  192 SKWVMMNQDTRRLQKVSDDVRDEYLVFCPKTPRLSFPEENNKSLKKISKLEDPAQHSRLGLSPRRADLDMNQHVNNVAYIGWV 274          
The following BLAST results are available for this feature:
BLAST of CX671298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FATB_GOSHI8.568e-3279.75Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_CUPHO5.553e-3174.68Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_CINCA1.465e-2364.56Myristoyl-acyl carrier protein thioesterase, chlor... [more]
FATB_UMBCA2.499e-2363.29Lauroyl-acyl carrier protein thioesterase, chlorop... [more]
FATA_CORSA2.504e-1548.00Oleoyl-acyl carrier protein thioesterase, chloropl... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_10B12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10B12-C24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671298 ID=CX671298; Name=CX671298; organism=Citrus sinensis; type=EST; length=816bp
CTGGTCTTCTAGATGCTGGCTTTGGTGCAACCCCAGCGATGGCTAAAAAG
AACCTGATATGGGTGGTTACTCGGATGCAGGTTGTTGTAGACCGCTATCC
CACTTGGAATGATGTTGTAAATGTAGAAACTTGGGTTAGTGCATCTGGAA
AAAATGGTATGCGGCGTGATTGGCTCATTCGCAATGCTAAGACAGGTGAA
ACATTAACAAGAGCAACCAGGTGGGGAATTTTTTGGTTAAGTTTTATTTC
TAGTGTTTTGTGTTCCTTTTTCTGATATCCTCTTTATAAGAAGGTTGCTG
GTTACTGAAATCATTATTTTATGTATTTTATATAGTTTATGGGTTCCAAG
GAAGGTAGCATGAATAATTTGGGTTGTTTGTATTATTAATCTCTCAAGAC
AGATACCAGAAATGTCTTTAATAGTATTTTTGTTTAAAAATTTGCTTTTC
TTACAAATTTTGTTAGCTGCTGCATATGTTAATGCAAATATTTACATCGT
AATGGGAAGTTGTGATTTATTTTTTATTTTTGTTGGAGTTGATGATTGTA
ATTTATAGTTTTTATGTTTGATTTCTGCAGTCTGTGGGTAATGATGAATA
AACTGACTAGGAGGTTGTCCAAAATGCCCGATGAAGTTCGTCAGGAAATT
GAACCGTATTTTCTGAATTCTGACCCTGTTGTCGATGAGGATAGCAGGAA
ATTACCAAAACTTGGCGACAGTACTGCAGATTATGTTCGTAGAGGTTTAA
CTCCTAGGTGGAGTGATTTAGATGTCAACCAGCATGTCAATAATGTGAAG
TACATTGGCTGGATCC
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