CX671298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATB_GOSHI (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum GN=FATB1 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.568e-32 Identity = 63/79 (79.75%), Postives = 74/79 (93.67%), Query Frame = 3 Query: 579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815 S+WVMMNKLTRRLSK+P+EVR EIEP+F+NSDPV+ EDS+KL KL DSTA++V +GLTP+WSDLDVNQHVNNVKYIGWI Sbjct: 244 SVWVMMNKLTRRLSKIPEEVRGEIEPFFMNSDPVLAEDSQKLVKLDDSTAEHVCKGLTPKWSDLDVNQHVNNVKYIGWI 322 HSP 2 Score: 129.798 bits (325), Expect = 1.786e-29 Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 3 Query: 3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 218 GLL GFGATP M KKNLIWVVTRMQVVVDRYPTW DVV V+TWVSASGKNGMRRDWL+ N++TGE LTRAT Sbjct: 172 GLLGEGFGATPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVSNSETGEILTRAT 243
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATB_CUPHO (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana GN=FATB1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.553e-31 Identity = 59/79 (74.68%), Postives = 72/79 (91.14%), Query Frame = 3 Query: 579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815 S+WVMMN+ TRRLSK+PDEVR EIEP+F++S PV+++D RKLPKL + TAD +R+GLTPRW+DLDVNQHVNNVKYIGWI Sbjct: 248 SVWVMMNQKTRRLSKIPDEVRNEIEPHFVDSPPVIEDDDRKLPKLDEKTADSIRKGLTPRWNDLDVNQHVNNVKYIGWI 326 HSP 2 Score: 106.686 bits (265), Expect = 1.620e-22 Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 3 Query: 3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 218 GL + GFG TP M K++LIWVV +MQV+V+RYPTW D V V TWV+ SGKNGMRRDWLI + TGE LTRA+ Sbjct: 176 GLSNDGFGRTPEMYKRDLIWVVAKMQVMVNRYPTWGDTVEVNTWVAKSGKNGMRRDWLISDCNTGEILTRAS 247
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATB_CINCA (Myristoyl-acyl carrier protein thioesterase, chloroplastic OS=Cinnamomum camphora GN=FATB1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.465e-23 Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 3 Query: 579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815 SL VMMN TRRLSK+P+EVR EI P F+++ V DE+ +K KL DSTADY++ GLTPRW+DLD+NQHVNN+KY+ WI Sbjct: 217 SLSVMMNTRTRRLSKIPEEVRGEIGPAFIDNVAVKDEEIKKPQKLNDSTADYIQGGLTPRWNDLDINQHVNNIKYVDWI 295 HSP 2 Score: 94.7449 bits (234), Expect = 6.369e-19 Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 218 G+L GFG T M+K++LIWVV R V V+RYP W D V VE WV ASG NG R D+L+R+ KTGE LTR T Sbjct: 145 GILGDGFGTTLEMSKRDLIWVVKRTHVAVERYPAWGDTVEVECWVGASGNNGRRHDFLVRDCKTGEILTRCT 216
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATB_UMBCA (Lauroyl-acyl carrier protein thioesterase, chloroplastic OS=Umbellularia californica GN=FATB1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.499e-23 Identity = 50/79 (63.29%), Postives = 64/79 (81.01%), Query Frame = 3 Query: 579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815 SL V+MN TRRLS +PDEVR EI P F+++ V D++ +KL KL DSTADY++ GLTPRW+DLDVNQHVNN+KY+ W+ Sbjct: 217 SLSVLMNTRTRRLSTIPDEVRGEIGPAFIDNVAVKDDEIKKLQKLNDSTADYIQGGLTPRWNDLDVNQHVNNLKYVAWV 295 HSP 2 Score: 99.3673 bits (246), Expect = 2.586e-20 Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 3 Query: 3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 218 G+L GFG T M+K++L+WVV R V V+RYPTW D V VE W+ ASG NGMRRD+L+R+ KTGE LTR T Sbjct: 145 GILGDGFGTTLEMSKRDLMWVVRRTHVAVERYPTWGDTVEVECWIGASGNNGMRRDFLVRDCKTGEILTRCT 216
BLAST of CX671298 vs. ExPASy Swiss-Prot
Match: FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum GN=FATA PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.504e-15 Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 3 GLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT-RW 224 G GF TP M K +LIWV RM + + RYP W+DVV +ETW + G+ G RRDW+I++ T E + RAT +W Sbjct: 120 GFSTDGFATTPTMRKLHLIWVTARMHIEIYRYPAWSDVVEIETWCQSEGRIGTRRDWIIKDFATDEVIGRATSKW 194 HSP 2 Score: 72.0182 bits (175), Expect = 4.421e-12 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 3 Query: 579 SLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVV--DEDSRKLPKLG--DSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWI 815 S WVMMN+ TRRL K+ D+VR E + + + +E+++ L K+ + A + R GL+PR +DLD+NQHVNNV YIGW+ Sbjct: 192 SKWVMMNQDTRRLQKVSDDVRDEYLVFCPKTPRLSFPEENNKSLKKISKLEDPAQHSRLGLSPRRADLDMNQHVNNVAYIGWV 274 The following BLAST results are available for this feature:
BLAST of CX671298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671298 ID=CX671298; Name=CX671298; organism=Citrus sinensis; type=EST; length=816bpback to top |