CX671289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 3.084e-102 Identity = 185/202 (91.58%), Postives = 193/202 (95.54%), Query Frame = -2 Query: 282 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 887 DYE+KINQAVFPGLQGGPHNHTITGLAVALKQATT EYKAYQEQV+SNC+KFA+TL++ GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAY FD AVKLAVKIK E QGTKLKDFVA QS+ FQSEI+KLRHDVEEYAKQFPTIGFEKETMKYKN Sbjct: 316 DYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTAEYKAYQEQVMSNCAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGTKLKDFVAAMQSSAFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 362.459 bits (929), Expect = 1.871e-99 Identity = 180/202 (89.11%), Postives = 191/202 (94.55%), Query Frame = -2 Query: 282 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 887 DYE+KINQAVFPGLQGGPHNHTITGLAVALKQATT EYKAYQEQV+SN +KFA+TL++ GYELVSGGTENHLVLVNLKNKGIDGS+VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD AVKLAVKIK E +GTKLKDFV +S+ QSEI+KLRHDVEEYAKQFPTIGFEKETMKYKN Sbjct: 316 DYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTAEYKAYQEQVMSNSAKFAETLVKSGYELVSGGTENHLVLVNLKNKGIDGSKVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTAMESSAIQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 517
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 2.444e-99 Identity = 183/203 (90.15%), Postives = 193/203 (95.07%), Query Frame = -2 Query: 282 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQ-SANFQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 887 DYE+KINQAVFPGLQGGPHNHTITGLAVALKQATTPEY+AYQEQVLSN SKFAQ L E GYELVSGGT+NHLVLVN+KNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVA FFDAAVK+AVK+K+ETQGTKLKDFVAT + SA +SEIAKLRHDVEEYAKQFPTIGFEKETMKYKN Sbjct: 316 DYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 518
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 349.362 bits (895), Expect = 1.639e-95 Identity = 175/203 (86.21%), Postives = 191/203 (94.09%), Query Frame = -2 Query: 282 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSAN-FQSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN 887 D+E+KINQAVFPGLQGGPHNHTITGLAVALKQATT EYKAYQEQVLSN +KFAQTL+E GYELVSGGT+NHLVLVNLK KGIDGSRVEKVLEAVHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA +FD AV +A+K+KSE QGTKLKDFV+ +S++ QSEIAKLRH+VEE+AKQFPTIGFEKETMKYKN Sbjct: 315 DFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 8.994e-94 Identity = 171/201 (85.07%), Postives = 188/201 (93.53%), Query Frame = -2 Query: 288 DYEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQSANF-QSEIAKLRHDVEEYAKQFPTIGFEKETMKY 887 DYE+KINQAVFPGLQGGPHNHTITGLAVALKQATTPEY+AYQEQVLSN SKFA+ L E GY+LVSGGTENHLVLVNLKNKGIDGSRVEKVLE VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA +FDAAV LA+K+K+E++GTKLKDFV Q++++ QSEI+KL+HDVEE+AKQFPTIGFEK TMKY Sbjct: 316 DYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMKY 516
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.658e-55 Identity = 108/194 (55.67%), Postives = 140/194 (72.16%), Query Frame = -2 Query: 306 YEEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVA-TTQSANFQSEIAKLRHDVEEYAKQFPTIGFE 884 +E++IN AVFP LQGGPHNH I +AVALKQA TP ++ Y Q+L N A LLE GY LVSGGT+NHLVLV+L+ KG+DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSRGF+E+DF KV F D V + +++KS+T TKL+DF + + ++A LR VE++A+ FP GF+ Sbjct: 311 FEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVKSKT--TKLQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPGFD 502
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 1.075e-54 Identity = 104/191 (54.45%), Postives = 138/191 (72.25%), Query Frame = -2 Query: 312 EEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET-QGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 881 E IN AVFPGLQGGPHNH I G+AVALKQA T E+K YQ QV++NC ++ L E+GY++V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F ++L ++I+S+T LK+F +Q+ + LR +VE +A FP G Sbjct: 289 ESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPG 479
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.127e-54 Identity = 104/191 (54.45%), Postives = 136/191 (71.20%), Query Frame = -2 Query: 312 EEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET-QGTKLKDFVATTQSANFQSEIAKLRHDVEEYAKQFPTIG 881 E IN AVFPGLQGGPHNH I G+AVALKQA T E+K YQ QV++NC ++ L E+GY++V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F ++L ++I+S+T LK+F +Q + LR VE +A FP G Sbjct: 289 ESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTLEFKVYQHQVVANCRALSEALTELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQGAVQALREKVESFASLFPLPG 479
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 211.46 bits (537), Expect = 5.334e-54 Identity = 107/193 (55.44%), Postives = 139/193 (72.02%), Query Frame = -2 Query: 312 EEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTK--LKDFVATTQSA-NFQSEIAKLRHDVEEYAKQFPTIG 881 E IN AVFPGLQGGPHNH I G+AVALKQA TPE++AYQ QV++NC A+ L+ +GY +V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F ++L ++I+ + G K LK+F+ A Q + LR +VE +A FP G Sbjct: 289 ESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFRAYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFRKVAHFIHRGIELTLQIQ-DAVGVKATLKEFMEKLAGAEEHQRAVTALRAEVESFATLFPLPG 480
BLAST of CX671289 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 211.075 bits (536), Expect = 6.967e-54 Identity = 107/193 (55.44%), Postives = 139/193 (72.02%), Query Frame = -2 Query: 312 EEKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTK--LKDFVATTQSA-NFQSEIAKLRHDVEEYAKQFPTIG 881 E IN AVFPGLQGGPHNH I G+AVALKQA TPE++AYQ QV++NC A+ L+ +GY +V+GG++NHL+LV+L++KG DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F ++L ++I+ + G K LK+F+ A +A LR +VE +A FP G Sbjct: 289 ESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFRAYQRQVVANCRALAEALMGLGYRVVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQ-DAVGVKATLKEFMEKLAGAEEHHRAVAALRAEVESFATLFPLPG 480 The following BLAST results are available for this feature:
BLAST of CX671289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671289 ID=CX671289; Name=CX671289; organism=Citrus sinensis; type=EST; length=888bpback to top |