FC871746

Overview
NameFC871746
Unique NameFC871746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig826 contig Csv1_Contig826:484..1035. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 223.016 bits (567), Expect = 7.510e-58
Identity = 100/143 (69.93%), Postives = 123/143 (86.01%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 429
            DD++   GSANINQRS+EGTRDTEIAMGAYQP+HTWA K S P GQ+YGYRMSLWAEH+  +++CF +PES+ CVR+VR++ E+NWKQ+AA+EV+ ++GHLLKYPV+VD  GKV  LPG   FPDVGGNI+G+FIAIQENLTI
Sbjct:  825 DDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGTFIAIQENLTI 967          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 1.673e-57
Identity = 96/143 (67.13%), Postives = 125/143 (87.41%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 429
            DD++   GSANINQRS+EGTRDTEIAMGAYQP+HTWA + S P GQ+YGYRMSLWAEH+  +++CF  PESLGCVR+VR+++E+NW+Q+ ++EV++++GHL+KYPV+VD  GKV  LPG  +FPDVGGN++GSF+AIQENLTI
Sbjct:  773 DDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAEENWEQFRSEEVSEMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGSFLAIQENLTI 915          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.854e-57
Identity = 100/143 (69.93%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 429
            DD+    GSANINQRSLEGTRDTEIAMG YQP ++WA K S P+GQ++GYRMSLWAEH+G +E+ F  PE++ CVRRVR LSE NW+QYAA+EVT++ GHLLKYPV VD TGKV++LPGC  FPD+GG I+GSF+A+QENLTI
Sbjct:  716 DDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQLSELNWRQYAAEEVTEMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGSFLALQENLTI 858          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 1.085e-56
Identity = 100/143 (69.93%), Postives = 118/143 (82.52%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 429
            DD+    GSANINQRSLEGTRDTEIAMG YQP H+WA K S P GQ++GYRMSLWAEH+G +E+ F  PE++ CVRRVR LSE NW QYAA+EVT++ GHLLKYPV VD TGKV++LPGC  FPD+GG I+GSF+ +QENLTI
Sbjct:  714 DDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWGQYAAEEVTEMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGSFLTLQENLTI 856          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.045e-55
Identity = 98/143 (68.53%), Postives = 118/143 (82.52%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 429
            DD+    GSANINQRSLEGTRDTEIAMG YQP H+WA K S P GQ++GYRMSLWAEH+G +E+ F  PE++ CVRRVR LSE NW+QYAA+EVT++ GHLLKYPV VD TGKV++LPG   FPD+GG I+GSF+ ++ENLTI
Sbjct:  724 DDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWRQYAAEEVTEMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGSFLVVEENLTI 866          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 6.824e-43
Identity = 80/143 (55.94%), Postives = 107/143 (74.83%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSF-IAIQENLT 426
            DD++   GSANINQRS+ GT+DTEIAMGAYQP HTWA K  +P GQVYGYRMSLWAEH+G   + F  P  L C+++V ++SE+NWK++   + ++L+GHL+KYP+ VD  GKV+ LP    FPDVGG I+G+  +A+ + LT
Sbjct:  725 DDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLT 867          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.877e-34
Identity = 67/134 (50.00%), Postives = 93/134 (69.40%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQ-LKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 399
            DD++   GSANINQRS++G RD+EIAMGAYQP H    + +   GQ++G+RMSLW EH+G +E+ F RPES+ CV++V  ++E+ W  Y++D++ Q L GHLL YP+ V   G V  LPG   FPD    +LG+
Sbjct:  670 DDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLATRQPAR--GQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKVNEVAEKYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVLGN 801          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.092e-32
Identity = 65/134 (48.51%), Postives = 92/134 (68.66%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQ-LKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 399
            DD++   GSANINQRS++G RD+EIAMG YQP H    + +   GQ++G+RM+LW EH+G +++ F RPESL CV++V  ++E+ W  Y++D++ Q L GHLL YP+ V   G V  LPG   FPD    +LG+
Sbjct:  670 DDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLATRQPAR--GQIHGFRMALWYEHLGMLDDVFQRPESLECVQKVNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVLGA 801          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.577e-31
Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVT-QLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 399
            DD++   GSANINQRS++G RD+EIAMGAYQP H   S      GQ++G+RMSLW EH+G ++E F  PES  CVR+V  ++E+ W  Y+++ +   L GHLL+YP+ V   G V  LPG   FPD    +LG+
Sbjct:  666 DDEYIIIGSANINQRSMDGARDSEIAMGAYQPHHL--STRQPARGQIHGFRMSLWYEHLGMLDESFLNPESEECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVLGA 797          
BLAST of FC871746 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.690e-31
Identity = 65/134 (48.51%), Postives = 88/134 (65.67%), Query Frame = 1
Query:    1 DDDHFKTGSANINQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVT-QLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 399
            DD++   GSANINQRS++G RD+EIAMG YQP H   S      GQ++G+RMSLW EH+G ++E F  P S+ C+ +V  +S++ W  Y+++ +   L GHLL+YPVDVD  G V   PG   FPD    ILG+
Sbjct:  668 DDEYIIIGSANINQRSMDGARDSEIAMGGYQPHHL--SHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKVNRISDKYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARILGT 799          
The following BLAST results are available for this feature:
BLAST of FC871746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PLDB1_ARATH7.510e-5869.93Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDB2_ARATH1.673e-5767.13Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH2.854e-5769.93Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH1.085e-5669.93Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH2.045e-5568.53Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH6.824e-4355.94Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDA1_MAIZE9.877e-3450.00Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]
PLDA1_ORYSJ1.092e-3248.51Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA1_RICCO1.577e-3149.25Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_BRAOC2.690e-3148.51Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3BC04FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3BC04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871746 ID=FC871746; Name=FC871746; organism=Citrus sinensis; type=EST; length=552bp
GACGACGACCATTTCAAAACAGGATCTGCAAATATCAATCAACGTTCCCT
GGAAGGCACCAGAGACACCGAAATAGCAATGGGGGCATATCAGCCACGCC
ACACCTGGGCGAGCAAACTCTCCAATCCTTATGGGCAAGTGTATGGTTAC
AGAATGTCATTATGGGCAGAGCACATTGGAGCCATTGAGGAATGTTTTAA
CAGACCGGAGAGTCTAGGATGTGTAAGAAGAGTAAGGTCACTGAGTGAAC
AGAATTGGAAACAGTATGCAGCCGATGAGGTAACACAATTGAAGGGTCAC
CTGCTTAAGTATCCAGTTGATGTTGATCCAACGGGCAAGGTTAACGCTCT
TCCTGGATGTGCACAATTTCCAGATGTGGGTGGCAACATATTGGGTTCAT
TTATAGCCATTCAAGAAAATCTCACCATTTGAATGAATCTTGCTTGTGCC
AAATTGCCTCGTTATTTTTGTGCCAAAATGTCATCAACTGTAAGATATAT
TCCGGAAAATTTCAGACCATGAATATCACATACATTTGTTATTTAAAACA
AA
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