CX671285

Overview
NameCX671285
Unique NameCX671285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3227 contig Csv1_Contig3227:596..1522. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 5.271e-92
Identity = 177/249 (71.08%), Postives = 195/249 (78.31%), Query Frame = 1
Query:  196 MASSGGGRFMAYXXXXXXXXXXXXXXXXXXXXX-----ILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVD 927
            +   GGGRFM Y                           ++QEKYLSELLAERHKL PFLPVLP+A+RLLNQEI+RVTTLL NA+VL QSGL+H SPL SGGIF N  AD NG AS+F SE S  + SS   NWL+S GSSSGLI KRTIRVDIPV+ YPNFNFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +EEMMRGKPGYEHLNEPLHILVEAELP+EIVDARLMQAREIL+DLL P++
Sbjct:   21 IGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPSERS--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPME 267          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 1.215e-88
Identity = 174/246 (70.73%), Postives = 193/246 (78.46%), Query Frame = 1
Query:  205 SGGGRFMAYXXXXXXXXXXXXXXXXXXXXX-----ILDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVD 927
            SGGGRF+ Y                          +++QEKYLSELLAERHKL PFLPVLP+  RL+NQEI+RVTTLL NA  L QS  +H SPL SGGIF N  AD NG AS+F SE S  + SS A NWL+S GSSSGLIVKRTIRVDIPV+KYPN+NFVGRLLGPRGNSLKRVEAST+CRVLIRGRGSIKDP +E+MMRGKPGYEHLNEPLHILVEAELP+EIVDARLMQAREIL+DLL PV+
Sbjct:   20 SGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS--VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVE 261          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 8.494e-58
Identity = 118/216 (54.63%), Postives = 148/216 (68.52%), Query Frame = 1
Query:  298 LDQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASP--LTSGGIFSN----GGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVD 927
            +D  +YL+ELLAE  KL PF+ VLP   RLLNQE+ RV+ ++ N        L H SP  + S  + SN    G    NGL+    S   G+       +W  + GS S   VKR +R++IPV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +E+ +RG+PGYEHLNE LHIL+EA+LP  IV+ RL QA+EI+E+LLKPVD
Sbjct:   27 IDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGM-----TMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVD 237          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.602e-56
Identity = 115/209 (55.02%), Postives = 143/209 (68.42%), Query Frame = 1
Query:  310 KYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASP--LTSGGIFSN-GGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVD 927
            +Y+S+LLAE  KL PF+ VLP   RLLNQEI R+T ++ N        L H SP  + S  + SN  G    G        I G      A  W  +  S S   VKR +R+D+PV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP +EE ++GKPGYEHLNE LHIL+EA+LP++IVD +L QA+EI+E+L+KPVD
Sbjct:   30 QYISQLLAEHQKLGPFMQVLPICSRLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG--PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVD 236          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.499e-54
Identity = 113/214 (52.80%), Postives = 143/214 (66.82%), Query Frame = 1
Query:  301 DQEKYLSELLAERHKLNPFLPVLPNAYRLLNQEIMRVTTLLGNASVLGQSGLEHASPLTSGGIFSNGGADTNGLASRFQSEISGLMQSS-----SAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPVD 927
            D+E+YL+ELL ER KL PFL V+PN  RLLN EI RV+      S       EH SP  S G  +NG  D  G +     E   L ++S     S   W+   G  +  IVK+ IR+D+PV+KYP++NFVGR+LGPRGNSLKRVE +T CRV IRGRGS+KD  +EE ++GKPGYEHL EPLH+L+EAELP +I+++RL  A   LE LLKP+D
Sbjct:   41 DRERYLTELLQERQKLGPFLQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSPFRSLGQPTNGKLDLEGWSMMQAEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMD 248          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKIA_XENLA (Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 6.144e-24
Identity = 54/122 (44.26%), Postives = 82/122 (67.21%), Query Frame = 1
Query:  556 MQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP 921
            M SSS +   S      G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P
Sbjct:   61 MNSSSNEKRTSELPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVP 182          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.793e-23
Identity = 55/146 (37.67%), Postives = 92/146 (63.01%), Query Frame = 1
Query:  484 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP 921
            GIF++     +   SR + ++     + S +   +    + G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P
Sbjct:   36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.793e-23
Identity = 55/146 (37.67%), Postives = 92/146 (63.01%), Query Frame = 1
Query:  484 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP 921
            GIF++     +   SR + ++     + S +   +    + G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P
Sbjct:   36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.793e-23
Identity = 55/146 (37.67%), Postives = 92/146 (63.01%), Query Frame = 1
Query:  484 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP 921
            GIF++     +   SR + ++     + S +   +    + G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P
Sbjct:   36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181          
BLAST of CX671285 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.793e-23
Identity = 55/146 (37.67%), Postives = 92/146 (63.01%), Query Frame = 1
Query:  484 GIFSNGGADTNGLASRFQSEISGLMQSSSAQNWLSSQGSSSGLIVKRTIRVDIPVEKYPNFNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKP 921
            GIF++     +   SR + ++     + S +   +    + G IV+   ++ +PV++YP+FNFVGR+LGPRG + K++EA T C++++RG+GS++D  +EE  RGKP +EHLNE LH+L+  E      + +L +A E ++ LL P
Sbjct:   36 GIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181          
The following BLAST results are available for this feature:
BLAST of CX671285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
QKIL2_ARATH5.271e-9271.08KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKIL1_ARATH1.215e-8870.73KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL3_ARATH8.494e-5854.63KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKIL4_ARATH1.602e-5655.02KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIL5_ARATH1.499e-5452.80KH domain-containing protein At1g09660 OS=Arabidop... [more]
QKIA_XENLA6.144e-2444.26Protein quaking-A OS=Xenopus laevis GN=qki-A PE=1 ... [more]
QKI_RAT6.793e-2337.67Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_PIG6.793e-2337.67Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1[more]
QKI_MOUSE6.793e-2337.67Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1[more]
QKI_HUMAN6.793e-2337.67Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10B05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10B05-C10-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671285 ID=CX671285; Name=CX671285; organism=Citrus sinensis; type=EST; length=927bp
GGGTCGGGATCATCCCACCAGCTACACAAATCTGCAGACAGCCGAACGCC
ACCTTCGTCATCATCAATCATCGCAATCTTCCGTCCGCTGTACGCTTCTC
ATCGCCGATCGTACCGCTGAAGCCACCGCCTGGATCTGATAAAGTGACCC
GACGGCGACGACCGTAGACACTAACAGCAGAAAACTAACTTAACGATGGC
GTCATCAGGTGGAGGCAGGTTCATGGCCTACTCCCTGTCACCTTCTGCTC
CTCACTCTCCTCACCTCCCCTCTCTCCGCTCCGCATCCTCCGCTATCCTC
GATCAAGAAAAATATCTCTCTGAGTTACTAGCTGAGCGTCATAAGCTTAA
TCCATTCCTGCCTGTGTTACCGAATGCTTACCGGCTGTTGAACCAGGAAA
TTATGCGTGTAACCACACTGTTGGGGAATGCATCAGTTTTAGGTCAAAGT
GGGCTTGAACATGCTAGCCCTCTCACCTCTGGAGGAATATTTTCAAATGG
AGGAGCTGATACGAATGGATTGGCATCACGGTTTCAATCAGAAATTTCTG
GTTTAATGCAGTCATCATCAGCACAAAACTGGCTTAGCTCACAAGGTAGC
TCATCAGGTCTCATTGTTAAGAGGACAATCAGAGTGGATATTCCAGTCGA
AAAATATCCTAATTTCAACTTTGTCGGGCGCCTCCTTGGTCCTCGAGGCA
ACTCGCTTAAGCGAGTCGAAGCTAGTACAGAATGCCGTGTTCTGATTAGG
GGACGCGGCAGTATAAAGGATCCAGCAAGGGAAGAAATGATGAGAGGAAA
ACCTGGGTATGAACATTTGAATGAGCCTCTCCATATCCTGGTTGAGGCAG
AATTGCCAGTTGAGATAGTTGATGCTCGCCTAATGCAAGCACGTGAGATA
CTTGAAGATTTGCTCAAGCCTGTGGAT
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