FC871743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.596e-42 Identity = 80/106 (75.47%), Postives = 95/106 (89.62%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNRT 319 KVDLK+Y +Y+ELS ALEKMFS FTIG C SHG+ +G++ES++ DLL+GSEYV TYED+DGDWMLVGDVPW+MF E+C+RLRIMKGSEAIGLAPRAMEKCKNR+ Sbjct: 175 KVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 6.066e-42 Identity = 79/105 (75.24%), Postives = 92/105 (87.62%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNR 316 K+DLK Y +Y+ELSSALEKMFSCFTIGQ SHG G+DGL+ESRL DLL GSEYV+TYED+D DWMLVGDVPW+MF +C++LRIMK SEAIGLAPR MEKC++R Sbjct: 200 KIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSR 304
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.010e-41 Identity = 74/105 (70.48%), Postives = 94/105 (89.52%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNR 316 KVDL+ Y++Y +LSSALEKMFSCFT+GQC HG G++ +SE +L DLLHGSE+VLTYED+DGDWMLVGDVPW++FTETC++L+IMKGS++IGLAP A+EK KN+ Sbjct: 214 KVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.951e-40 Identity = 77/105 (73.33%), Postives = 91/105 (86.67%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNR 316 KVDLK+Y NY ELS ALEKMFSCFT+G +S+G G+DGLS+ RLMDL +G+E VLTYED+D DWMLVGDVPW MFT++CRRLRIMKGS+A+GLAPRA +K KNR Sbjct: 161 KVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNR 265
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 9.064e-38 Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL--APRAMEKCKNR 316 KVDL+ Y+NY ELSSALEKMF+ FT+GQC S+G G+D LSE++L DLL+G +YVLTYED+DGDWMLVGDVPW+MF + C++L+IMKG +AIGL APRAMEK K R Sbjct: 231 KVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMR 337
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.184e-37 Identity = 71/106 (66.98%), Postives = 91/106 (85.85%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNRT 319 K+DLK+Y Y +LS+AL KMFS FTIG G+ +D ++ES+L+DLL+GS+YV TYED+DGDWMLVGDVPW+MF ++C+R+RIMKGSEAIGLAPRA+EKCKNR+ Sbjct: 133 KIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.916e-36 Identity = 73/108 (67.59%), Postives = 89/108 (82.41%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAI--GLAPRAMEKCKNRT 319 KVDLK+Y +Y ELS +L KMFS FT G C+S G+ +D ++ES+L DLL+ S+YV TYED+DGDWMLVGDVPW+MF E+C+RLRIMKG EAI GLAPRAM KCKNR+ Sbjct: 138 KVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGM--KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 1.447e-35 Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNRT 319 KVDLK+Y++Y +LS AL KMFS FT+G + G+ D ++ES++MDLL+ SEYV +YED+DGDWMLVGDVPW MF E+C+RLRIMKGSEAIGLAPRAMEK KNR+ Sbjct: 125 KVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.890e-35 Identity = 72/107 (67.29%), Postives = 90/107 (84.11%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEK-CKNRT 319 KVDLK+Y +Y +LS AL KMFS FT+G + G+ D ++ES+LM+LL+ SEYV +YED+DGDWMLVGDVPW+MF E+C+RLRIMKGSEA+GLAPRAMEK CKNR+ Sbjct: 139 KVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS 243
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.147e-32 Identity = 67/109 (61.47%), Postives = 89/109 (81.65%), Query Frame = 2 Query: 2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGL----SESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNR 316 K+DL++Y +Y ELS+AL MFS FT+G+ HG G++G+ +E +LMDL++ +YV +YED+DGDWMLVGDVPW MF +TC+RLR+MKGS+AIGLAPRAMEKCK+R Sbjct: 125 KIDLRMYKSYDELSNALSNMFSSFTMGK---HG--GEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSR 228 The following BLAST results are available for this feature:
BLAST of FC871743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871743 ID=FC871743; Name=FC871743; organism=Citrus sinensis; type=EST; length=503bpback to top |