FC871743

Overview
NameFC871743
Unique NameFC871743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length503
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11331 contig Csv1_Contig11331:422..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.596e-42
Identity = 80/106 (75.47%), Postives = 95/106 (89.62%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNRT 319
            KVDLK+Y +Y+ELS ALEKMFS FTIG C SHG+   +G++ES++ DLL+GSEYV TYED+DGDWMLVGDVPW+MF E+C+RLRIMKGSEAIGLAPRAMEKCKNR+
Sbjct:  175 KVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.066e-42
Identity = 79/105 (75.24%), Postives = 92/105 (87.62%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNR 316
            K+DLK Y +Y+ELSSALEKMFSCFTIGQ  SHG  G+DGL+ESRL DLL GSEYV+TYED+D DWMLVGDVPW+MF  +C++LRIMK SEAIGLAPR MEKC++R
Sbjct:  200 KIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSR 304          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.010e-41
Identity = 74/105 (70.48%), Postives = 94/105 (89.52%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNR 316
            KVDL+ Y++Y +LSSALEKMFSCFT+GQC  HG  G++ +SE +L DLLHGSE+VLTYED+DGDWMLVGDVPW++FTETC++L+IMKGS++IGLAP A+EK KN+
Sbjct:  214 KVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.951e-40
Identity = 77/105 (73.33%), Postives = 91/105 (86.67%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNR 316
            KVDLK+Y NY ELS ALEKMFSCFT+G  +S+G  G+DGLS+ RLMDL +G+E VLTYED+D DWMLVGDVPW MFT++CRRLRIMKGS+A+GLAPRA +K KNR
Sbjct:  161 KVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNR 265          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 9.064e-38
Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGL--APRAMEKCKNR 316
            KVDL+ Y+NY ELSSALEKMF+ FT+GQC S+G  G+D LSE++L DLL+G +YVLTYED+DGDWMLVGDVPW+MF + C++L+IMKG +AIGL  APRAMEK K R
Sbjct:  231 KVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMR 337          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.184e-37
Identity = 71/106 (66.98%), Postives = 91/106 (85.85%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNRT 319
            K+DLK+Y  Y +LS+AL KMFS FTIG     G+  +D ++ES+L+DLL+GS+YV TYED+DGDWMLVGDVPW+MF ++C+R+RIMKGSEAIGLAPRA+EKCKNR+
Sbjct:  133 KIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 2.916e-36
Identity = 73/108 (67.59%), Postives = 89/108 (82.41%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAI--GLAPRAMEKCKNRT 319
            KVDLK+Y +Y ELS +L KMFS FT G C+S G+  +D ++ES+L DLL+ S+YV TYED+DGDWMLVGDVPW+MF E+C+RLRIMKG EAI  GLAPRAM KCKNR+
Sbjct:  138 KVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGM--KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.447e-35
Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNRT 319
            KVDLK+Y++Y +LS AL KMFS FT+G   + G+   D ++ES++MDLL+ SEYV +YED+DGDWMLVGDVPW MF E+C+RLRIMKGSEAIGLAPRAMEK KNR+
Sbjct:  125 KVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.890e-35
Identity = 72/107 (67.29%), Postives = 90/107 (84.11%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGLSESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEK-CKNRT 319
            KVDLK+Y +Y +LS AL KMFS FT+G   + G+   D ++ES+LM+LL+ SEYV +YED+DGDWMLVGDVPW+MF E+C+RLRIMKGSEA+GLAPRAMEK CKNR+
Sbjct:  139 KVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS 243          
BLAST of FC871743 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.147e-32
Identity = 67/109 (61.47%), Postives = 89/109 (81.65%), Query Frame = 2
Query:    2 KVDLKIYSNYMELSSALEKMFSCFTIGQCDSHGLPGQDGL----SESRLMDLLHGSEYVLTYEDRDGDWMLVGDVPWDMFTETCRRLRIMKGSEAIGLAPRAMEKCKNR 316
            K+DL++Y +Y ELS+AL  MFS FT+G+   HG  G++G+    +E +LMDL++  +YV +YED+DGDWMLVGDVPW MF +TC+RLR+MKGS+AIGLAPRAMEKCK+R
Sbjct:  125 KIDLRMYKSYDELSNALSNMFSSFTMGK---HG--GEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSR 228          
The following BLAST results are available for this feature:
BLAST of FC871743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
IAA30_ORYSJ1.596e-4275.47Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA27_ARATH6.066e-4275.24Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA8_ARATH3.010e-4170.48Auxin-responsive protein IAA8 OS=Arabidopsis thali... [more]
IAA21_ORYSJ1.951e-4073.33Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]
IAA9_ARATH9.064e-3869.16Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA16_ARATH1.184e-3766.98Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
AUX28_SOYBN2.916e-3667.59Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA14_ARATH1.447e-3567.92Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA7_ARATH1.890e-3567.29Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA17_ARATH1.147e-3261.47Auxin-responsive protein IAA17 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1CF12FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1CF12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871743 ID=FC871743; Name=FC871743; organism=Citrus sinensis; type=EST; length=503bp
GAAGGTTGATCTCAAAATCTACAGCAATTACATGGAACTCTCTTCAGCTC
TTGAGAAGATGTTCAGCTGCTTTACCATTGGGCAATGTGATTCTCATGGT
CTTCCGGGGCAAGACGGCCTAAGTGAGAGTCGTCTGATGGATCTTCTCCA
TGGTTCTGAATATGTGCTTACATATGAAGACAGGGATGGTGACTGGATGC
TTGTTGGTGATGTCCCTTGGGATATGTTCACTGAGACGTGTAGAAGACTT
CGCATCATGAAAGGTTCAGAGGCTATTGGACTGGCTCCAAGGGCCATGGA
GAAGTGCAAGAACCGAACTTAGTGTCGCAAATATCTTGAAAGACTTAAAA
AGGGAGAAAATTTGTTTTTTTCAGAATCCAAACACGTGAAAAGATGTTAG
GCATTTTGTTCAAGGACCCTATTATTATATAAATGTTATCAAATATCATA
AGTTTGCTGTATTTAATTAGTTAATATGGGGAAAACATCCCTCTAGACAA
AGA
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